MirGeneDB 3.0
MirGeneDB ID

Sro-Mir-29-P2p1

Family name MIR-29 (all species)
Species Roscoff worm (Symsagittifera roscoffensis)
MiRBase ID
Paralogues Sro-Mir-29-P1p1  Sro-Mir-29-P1p2  Sro-Mir-29-P2p2 
Orthologues Agr-Mir-29-P2  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cte-Mir-29-P2  Dgr-Mir-29-P2  Dma-Mir-29-P2  Dpu-Mir-29-P2  Eba-Mir-29-P2  Esc-Mir-29-P2  Gsp-Mir-29  Hru-Mir-29-P2  Lgi-Mir-29-P2  Lhy-Mir-29-P2  Llo-Mir-29-P2  Mgi-Mir-29-P2  Mom-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ofu-Mir-29-P2  Ovu-Mir-29-P2  Pau-Mir-29-P2  Pcr-Mir-29-P2  Pdu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Pve-Mir-29-P2  Rph-Mir-29-P2  Sko-Mir-29-P2  Sme-Mir-29-o2  Spu-Mir-29-P2  War-Mir-29-P2  Xbo-Mir-29-P2 
Node of Origin (locus) S. roscoffensis
Node of Origin (family) Bilateria
Genome context
(GCA_025153585.1_SymRos_1_5_genomic)		 JANVAR010000541.1: 102958-103014 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-29-P2p1)		 Mir-29-P2p1 JANVAR010000541.1: 102958-103014 [-] UCSC Ensembl
Mir-29-P2p2 JANVAR010000541.1: 102958-103014 [-] UCSC Ensembl
Mir-29-P1p1 JANVAR010000541.1: 103104-103159 [-] UCSC Ensembl
Seed AGCACCA
Precursor
(pre-Mir +30nt flank)		 
GACAUCUGAUUUCAAAGAGGUUUUUUGAAGUCCGGUUUGCCGUGGUGGUUAGAGAACGUAUCAUCUAGCACCAUGUCAUACCGGUCUCUACCUAAAAUUGAAUCGAGCUAAUAUGUA
Get precursor sequence
Structure
        10               20        30        40        50        
GACAUCUGAUUUCAAAG-------|   UUUUUGA  U     U  C       G     GAAC 
                        AGGU       AG CCGGU UG CGUGGUG UUAGA    G
                        UCCA       UC GGCCA AC GUACCAC GAUCU    U
AUGUAUAAUCGAGCUAAGUUAAAA^   UC-----  U     U  U       -     ACUA 
     110       100        90             80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Po
Star sequence

Sro-Mir-29-P2p1_5p*
mirBase accessionNone
Sequence 
0- UCCGGUUUGCCGUGGUGGUUAGA -23
Get sequence
Mature sequence

Sro-Mir-29-P2p1_3p
mirBase accessionNone
Sequence 
35- UAGCACCAUGUCAUACCGGUCU -57
Get sequence