MirGeneDB 3.0
MirGeneDB ID

Sro-Mir-12496-P3

Family name MIR-12496 (all species)
Species Roscoff worm (Symsagittifera roscoffensis)
MiRBase ID
Paralogues Sro-Mir-12496-P1  Sro-Mir-12496-P2 
Orthologues Hmi-Mir-12496  Xbo-Mir-12496 
Node of Origin (locus) S. roscoffensis
Node of Origin (family) Xenacoelomorpha
Genome context
(GCA_025153585.1_SymRos_1_5_genomic)		 JANVAR010000125.1: 175402-175458 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-12496-P3)		 Mir-12496-P3 JANVAR010000125.1: 175402-175458 [-] UCSC Ensembl
Mir-12496-P2 JANVAR010000125.1: 175530-175582 [-] UCSC Ensembl
Mir-12496-P1 JANVAR010000125.1: 175645-175709 [-] UCSC Ensembl
Seed UGUGCAU
Precursor
(pre-Mir +30nt flank)		 
UAAAUAACCCAAGUUAGAGCUAUUGCGAAACGUUGUUCCGGUUUGCAGAAUAUGAUAUCUUAAUAUUGUGCAUACCCCGACAACUAUUGACAAAGCUCACGAAAUGAACAAUUUUCU
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Structure
        10           20         30        40        50        
UAAAUAACCCAAGUUAG---|   A   -   AAC      CC   U    G    UGAUA 
                    AGCU UUG CGA   GUUGUU  GGU UGCA AAUA     \
                    UCGA AAC GUU   CAACAG  CCA ACGU UUAU     U
UCUUUUAACAAGUAAAGCAC^   -   A   AU-      CC   U    G    AAUUC 
     110       100         90         80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Po
Star sequence

Sro-Mir-12496-P3_5p*
mirBase accessionNone
Sequence 
0- CGUUGUUCCGGUUUGCAGAAUA -22
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Mature sequence

Sro-Mir-12496-P3_3p
mirBase accessionNone
Sequence 
35- UUGUGCAUACCCCGACAACUAU -57
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