MirGeneDB 3.0
MirGeneDB ID

Ofu-Mir-92-o148

Family name MIR-92 (all species)
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues Ofu-Mir-92-o141  Ofu-Mir-92-o142  Ofu-Mir-92-o143  Ofu-Mir-92-o144  Ofu-Mir-92-o145  Ofu-Mir-92-o146  Ofu-Mir-92-o147  Ofu-Mir-92-o149 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) O. fusiformis
Node of Origin (family) Bilateria
Genome context
(GCA_903813345.2_Owenia)		 CAIIXF020000005.1: 11521559-11521617 [+]
Clustered miRNAs
(< 50kb from Mir-92-o148)		 Mir-92-o147 CAIIXF020000005.1: 11520986-11521044 [+]
Mir-92-o148 CAIIXF020000005.1: 11521559-11521617 [+]
Mir-92-o149 CAIIXF020000005.1: 11521892-11521952 [+]
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
GCGUGCAUGACUUUAGGAUGUUCUCUGUGUAGGCUAAGACGUGUGCAAGAUUGUUUGUGGUAGCUCAAAUUGCACUUGUCUCGGUCUGCCAAGAGAAAAAAAUUGACUAACAAAUAACA
Get precursor sequence
Structure
        10        20          30        40        50         
GCGUGCAUGACUUUAGGAUG--|     GU      UA     U      GAUUGUUUGU 
                      UUCUCU  GUAGGC  AGACG GUGCAA          \
                      AAGAGA  CGUCUG  UCUGU CACGUU          G
ACAAUAAACAAUCAGUUAAAAA^     AC      GC     U      AAACUCGAUG 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data.
3' NTU No
MotifsNo
Tissue expression
- +
To To
Star sequence

Ofu-Mir-92-o148_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGCUAAGACGUGUGCAAGAUU -22
Get sequence
Mature sequence

Ofu-Mir-92-o148_3p
mirBase accessionNone
Sequence 
37- AAUUGCACUUGUCUCGGUCUGC -59
Get sequence