MirGeneDB 3.0

39 microRNA genes with node of origin O. fusiformis

						Sort by genome coordinates								Motifs
MirGeneDB ID ▲	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	Iso­miR	3' NTU	UG	UGUG	CNNC
Ofu-Mir-2-o153	None	MIR-2	CACAGCC	None	None	CAIIXF020000003.1	15958470	15958526	+	O. fusiformis	Protostomia		No		1	1
Ofu-Mir-2-o154	None	MIR-2	AUCACAG	None	None	CAIIXF020000003.1	15959506	15959565	+	O. fusiformis	Protostomia		No			1
Ofu-Mir-2-o155	None	MIR-2	AUCACAG	None	None	CAIIXF020000003.1	15960009	15960067	+	O. fusiformis	Protostomia		No			1
Ofu-Mir-2-o156	None	MIR-2	AUCACAG	None	None	CAIIXF020000003.1	15960548	15960608	+	O. fusiformis	Protostomia		No		1	1
Ofu-Mir-2-o157	None	MIR-2	AUCACAG	None	None	CAIIXF020000003.1	15962486	15962544	+	O. fusiformis	Protostomia		No			1
Ofu-Mir-2-o158	None	MIR-2	AUCACAG	None	None	CAIIXF020000003.1	15964675	15964734	+	O. fusiformis	Protostomia		No
Ofu-Mir-22-P2j	None	MIR-22	AGCUGCC	None	None	CAIIXF020000012.1	1297053	1297111	-	O. fusiformis	Bilateria		No
Ofu-Mir-22-P2k	None	MIR-22	AGCUGCC	None	None	CAIIXF020000012.1	1297290	1297347	-	O. fusiformis	Bilateria		No	1
Ofu-Mir-92-o141	None	MIR-92	AUUGCAC	None	None	CAIIXF020000007.1	16102466	16102523	-	O. fusiformis	Bilateria		No	1		1
Ofu-Mir-92-o142	None	MIR-92	AUUGCAC	None	None	CAIIXF020000007.1	16098734	16098792	-	O. fusiformis	Bilateria		No		1
Ofu-Mir-92-o143	None	MIR-92	AUUGCAC	None	None	CAIIXF020000007.1	16094923	16094980	-	O. fusiformis	Bilateria		No		1
Ofu-Mir-92-o144	None	MIR-92	AUUGCAC	None	None	CAIIXF020000007.1	16094086	16094141	-	O. fusiformis	Bilateria		No	1	1	1
Ofu-Mir-92-o145	None	MIR-92	AUUGCAC	None	None	CAIIXF020000007.1	16093752	16093810	-	O. fusiformis	Bilateria		No			1
Ofu-Mir-92-o146	None	MIR-92	AUUGCAC	None	None	CAIIXF020000007.1	16092897	16092953	-	O. fusiformis	Bilateria		No			1
Ofu-Mir-92-o147	None	MIR-92	AUUGCAC	None	None	CAIIXF020000005.1	11520986	11521044	+	O. fusiformis	Bilateria		No		1	1
Ofu-Mir-92-o148	None	MIR-92	AUUGCAC	None	None	CAIIXF020000005.1	11521559	11521617	+	O. fusiformis	Bilateria		No
Ofu-Mir-92-o149	None	MIR-92	AUUGCAC	None	None	CAIIXF020000005.1	11521892	11521952	+	O. fusiformis	Bilateria		No		1	1
Ofu-Mir-96-P1p	None	MIR-96	UUGGCAC	None	None	CAIIXF020000004.1	31239392	31239454	+	O. fusiformis	Bilateria		Unknown	1
Ofu-Mir-96-P1q	None	MIR-96	UUGGCAC	None	None	CAIIXF020000011.1	30689895	30689952	-	O. fusiformis	Bilateria		No		1	1
Ofu-Mir-277-P22	None	MIR-277	AAAUGCA	None	None	CAIIXF020000010.1	35255866	35255921	-	O. fusiformis	Protostomia		No	1	1
Ofu-Mir-277-P23	None	MIR-277	AAAUGCA	None	None	CAIIXF020000010.1	35254985	35255041	-	O. fusiformis	Protostomia		No			1
Ofu-Mir-279-o53	None	MIR-279	GACUAGA	None	None	CAIIXF020000005.1	28262820	28262871	+	O. fusiformis	Protostomia		No	1	1	1
Ofu-Mir-279-o54	None	MIR-279	GACUAGA	None	None	CAIIXF020000005.1	28263645	28263699	+	O. fusiformis	Protostomia		No			1
Ofu-Mir-279-o55	None	MIR-279	GACUAGA	None	None	CAIIXF020000005.1	28263348	28263402	+	O. fusiformis	Protostomia		No
Ofu-Mir-279-o56	None	MIR-279	GACUAGA	None	None	CAIIXF020000001.1	23396616	23396670	-	O. fusiformis	Protostomia		No	1		1
Ofu-Mir-279-o57	None	MIR-279	GACUAGA	None	None	CAIIXF020000005.1	28262369	28262425	+	O. fusiformis	Protostomia		No			1
Ofu-Mir-1993-P12	None	MIR-1993	AUUAUGC	None	None	CAIIXF020000001.1	39666153	39666210	-	O. fusiformis	Protostomia		No
Ofu-Mir-1993-P13	None	MIR-1993	CGGGAAU	None	None	CAIIXF020000001.1	8469791	8469848	+	O. fusiformis	Protostomia		No		1
Ofu-Mir-1994-P9	None	MIR-1994	GAGACAG	None	None	CAIIXF020000001.1	56576378	56576438	+	O. fusiformis	Lophotrochozoa		No			1
Ofu-Mir-1994-P10	None	MIR-1994	GAGACAG	None	None	CAIIXF020000001.1	56578318	56578375	+	O. fusiformis	Lophotrochozoa		No	1		1
Ofu-Novel-1	None	OFU-NOVEL-1	AUUGAAC	None	None	CAIIXF020000005.1	17204261	17204318	-	O. fusiformis	O. fusiformis		No			1
Ofu-Novel-2	None	OFU-NOVEL-2	GUGGAGA	None	None	CAIIXF020000006.1	22196940	22196999	+	O. fusiformis	O. fusiformis		No
Ofu-Novel-3	None	OFU-NOVEL-3	ACUGCAA	None	None	CAIIXF020000005.1	12026764	12026823	+	O. fusiformis	O. fusiformis		No	1	1	1
Ofu-Novel-4	None	OFU-NOVEL-4	CUUCAGU	None	None	CAIIXF020000009.1	37179703	37179762	+	O. fusiformis	O. fusiformis		No			1
Ofu-Novel-5	None	OFU-NOVEL-5	AGAGUCC	None	None	CAIIXF020000009.1	37180959	37181018	+	O. fusiformis	O. fusiformis		No
Ofu-Novel-6	None	OFU-NOVEL-6	GAGGGGC	None	None	CAIIXF020000011.1	22363723	22363778	-	O. fusiformis	O. fusiformis		No			1
Ofu-Novel-7	None	OFU-NOVEL-7	GGUGAUA	None	None	CAIIXF020000011.1	26190832	26190890	+	O. fusiformis	O. fusiformis		No
Ofu-Novel-8	None	OFU-NOVEL-8	GUCCUAG	None	None	CAIIXF020000058.1	48082	48148	+	O. fusiformis	O. fusiformis		No			1
Ofu-Novel-9	None	OFU-NOVEL-9	CGAUUCU	None	None	CAIIXF020000001.1	27118641	27118697	-	O. fusiformis	O. fusiformis		No			1

(red - mature/co-mature, blue - star)

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