| MirGeneDB ID | Ofu-Novel-1 |
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| Family name |
OFU-NOVEL-1 (all species) |
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| Species |
Tubeworm (Owenia fusiformis) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. fusiformis
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| Node of Origin (family) |
O. fusiformis
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Genome context
(GCA_903813345.2_Owenia) |
CAIIXF020000005.1: 17204261-17204318 [-]
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| Seed |
AUUGAAC |
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Precursor
(pre-Mir +30nt flank) |
UGGUUUGGUGACAACUAGAAAGGCCAGGUUUGGUGGGUGGUGGUACAACAGCUUAAAGUAAAGUGCUAUUGAACCACCAGCCAGCAAGUUAAGGGGCUCUUAAAUCAACAAACAACAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UGGUUUGGUGACAACUAGAAA AGG---| G G A C UUAAA
GGCC UUUG UGG UGGUGGU CAA AGC G
UCGG GAAC ACC ACCACCA GUU UCG U
UACAACAAACAACUAAAUUC- GGAAUU^ G G A A UGAAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Ofu-Novel-1_5p* |
| mirBase accession | None |
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| Sequence |
0- UGGUGGGUGGUGGUACAACAGC -22
Get sequence
|
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| Mature sequence |
Ofu-Novel-1_3p |
| mirBase accession | None |
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| Sequence |
36- UAUUGAACCACCAGCCAGCAAG -58
Get sequence
|
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