MirGeneDB 3.0
98 Owenia fusiformis microRNA genes
Sort by genome coordinates Motifs Tissue expression
- +
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Ow Ow
Ofu-Bantam None BANTAM GAGAUCA None None CAIIXF020000009.1 32750669 32750726 + Protostomia Protostomia No
Ofu-Let-7 None LET-7 GAGGUAG None None CAIIXF020000010.1 10549668 10549735 + Bilateria Bilateria No 1 1
Ofu-Mir-1 None MIR-1 GGAAUGU None None CAIIXF020000001.1 12267922 12267980 - Bilateria Bilateria No 1
Ofu-Mir-2-o153 None MIR-2 CACAGCC None None CAIIXF020000003.1 15958470 15958526 + O. fusiformis Protostomia No 1 1
Ofu-Mir-2-o154 None MIR-2 AUCACAG None None CAIIXF020000003.1 15959506 15959565 + O. fusiformis Protostomia No 1
Ofu-Mir-2-o155 None MIR-2 AUCACAG None None CAIIXF020000003.1 15960009 15960067 + O. fusiformis Protostomia No 1
Ofu-Mir-2-o156 None MIR-2 AUCACAG None None CAIIXF020000003.1 15960548 15960608 + O. fusiformis Protostomia No 1 1
Ofu-Mir-2-o157 None MIR-2 AUCACAG None None CAIIXF020000003.1 15962486 15962544 + O. fusiformis Protostomia No 1
Ofu-Mir-2-o158 None MIR-2 AUCACAG None None CAIIXF020000003.1 15964675 15964734 + O. fusiformis Protostomia No
Ofu-Mir-2-P12 None MIR-2 AUCACAG None None CAIIXF020000003.1 15958948 15959009 + Lophotrochozoa Protostomia No 1
Ofu-Mir-7 None MIR-7 GGAAGAC None None CAIIXF020000010.1 11198659 11198719 + Bilateria Bilateria Unknown 1 1
Ofu-Mir-8 None MIR-8 AAUACUG None None CAIIXF020000001.1 56247895 56247955 - Nephrozoa Nephrozoa No 1
Ofu-Mir-9 None MIR-9 CUUUGGU None None CAIIXF020000010.1 9267572 9267632 + Bilateria Bilateria No 1
Ofu-Mir-10-P1 None MIR-10 ACCCUGU None None CAIIXF020000001.1 18323764 18323821 + Bilateria Eumetazoa No
Ofu-Mir-10-P2 None MIR-10 ACCCGUA None None CAIIXF020000010.1 10549377 10549433 + Bilateria Eumetazoa Yes 1
Ofu-Mir-10-P3 None MIR-10 CCCUGAG None None CAIIXF020000010.1 10556680 10556733 + Bilateria Eumetazoa Unknown 1
Ofu-Mir-10-P4 None MIR-10 ACCCUGU None None CAIIXF020000001.1 18379551 18379609 - Protostomia Eumetazoa No
Ofu-Mir-10-P5 None MIR-10 UACCCUG None None CAIIXF020000001.1 18062015 18062073 + Lophotrochozoa Eumetazoa No 1
Ofu-Mir-10-P6 None MIR-10 UUACCCU None None CAIIXF020000001.1 17943429 17943488 + Neotrochozoa Eumetazoa Unknown 1
Ofu-Mir-10-P7 None MIR-10 ACCCUGU None None CAIIXF020000001.1 18228320 18228380 + Annelida Eumetazoa No 1
Ofu-Mir-12 None MIR-12 GAGUAUU None None CAIIXF020000008.1 38332955 38333011 + Protostomia Protostomia Unknown 1 1
Ofu-Mir-22-P1 None MIR-22 GCUGCCU None None CAIIXF020000012.1 1303131 1303189 - Bilateria Bilateria No 1
Ofu-Mir-22-P2j None MIR-22 AGCUGCC None None CAIIXF020000012.1 1297053 1297111 - O. fusiformis Bilateria No
Ofu-Mir-22-P2k None MIR-22 AGCUGCC None None CAIIXF020000012.1 1297290 1297347 - O. fusiformis Bilateria No 1
Ofu-Mir-29-P1 None MIR-29 AGCACCA None None CAIIXF020000005.1 29000622 29000678 + Bilateria Bilateria No
Ofu-Mir-29-P2 None MIR-29 AGCACCA None None CAIIXF020000005.1 29005065 29005124 + Bilateria Bilateria No 1
Ofu-Mir-31 None MIR-31 GGCAAGA None None CAIIXF020000001.1 6375565 6375625 - Bilateria Bilateria No 1
Ofu-Mir-33 None MIR-33 UGCAUUG None None CAIIXF020000002.1 20706378 20706434 - Bilateria Bilateria No 1 1 1
Ofu-Mir-34 None MIR-34 GGCAGUG None None CAIIXF020000010.1 35250862 35250920 - Bilateria Bilateria No
Ofu-Mir-36 None MIR-36 CACCGGG None None CAIIXF020000001.1 23393833 23393889 - Protostomia Protostomia No 1
Ofu-Mir-67 None MIR-67 CACAACC None None CAIIXF020000012.1 30994469 30994528 - Protostomia Protostomia Unknown 1 1
Ofu-Mir-71 None MIR-71 GAAAGAC None None CAIIXF020000003.1 15950516 15950575 + Nephrozoa Nephrozoa No 1
Ofu-Mir-76 None MIR-76 UCGUUGU None None CAIIXF020000002.1 28092152 28092211 - Nephrozoa Nephrozoa No
Ofu-Mir-87-P1 None MIR-87 UGAGCAA None None CAIIXF020000007.1 15864089 15864146 - Protostomia Protostomia No
Ofu-Mir-87-P2 None MIR-87 UGAGCAA None None CAIIXF020000007.1 15863508 15863564 - Protostomia Protostomia No 1
Ofu-Mir-92-o141 None MIR-92 AUUGCAC None None CAIIXF020000007.1 16102466 16102523 - O. fusiformis Bilateria No 1 1
Ofu-Mir-92-o142 None MIR-92 AUUGCAC None None CAIIXF020000007.1 16098734 16098792 - O. fusiformis Bilateria No 1
Ofu-Mir-92-o143 None MIR-92 AUUGCAC None None CAIIXF020000007.1 16094923 16094980 - O. fusiformis Bilateria No 1
Ofu-Mir-92-o144 None MIR-92 AUUGCAC None None CAIIXF020000007.1 16094086 16094141 - O. fusiformis Bilateria No 1 1 1
Ofu-Mir-92-o145 None MIR-92 AUUGCAC None None CAIIXF020000007.1 16093752 16093810 - O. fusiformis Bilateria No 1
Ofu-Mir-92-o146 None MIR-92 AUUGCAC None None CAIIXF020000007.1 16092897 16092953 - O. fusiformis Bilateria No 1
Ofu-Mir-92-o147 None MIR-92 AUUGCAC None None CAIIXF020000005.1 11520986 11521044 + O. fusiformis Bilateria No 1 1
Ofu-Mir-92-o148 None MIR-92 AUUGCAC None None CAIIXF020000005.1 11521559 11521617 + O. fusiformis Bilateria No
Ofu-Mir-92-o149 None MIR-92 AUUGCAC None None CAIIXF020000005.1 11521892 11521952 + O. fusiformis Bilateria No 1 1
Ofu-Mir-96-P1p None MIR-96 UUGGCAC None None CAIIXF020000004.1 31239392 31239454 + O. fusiformis Bilateria Unknown 1
Ofu-Mir-96-P1q None MIR-96 UUGGCAC None None CAIIXF020000011.1 30689895 30689952 - O. fusiformis Bilateria No 1 1
Ofu-Mir-96-P2 None MIR-96 UUGGCAC None None CAIIXF020000005.1 20597186 20597248 - Bilateria Bilateria Unknown 1
Ofu-Mir-96-P3 None MIR-96 AUGGCAC None None CAIIXF020000005.1 20598463 20598522 - Bilateria Bilateria Unknown 1 1
Ofu-Mir-124 None MIR-124 AAGGCAC None None CAIIXF020000001.1 20356511 20356566 + Bilateria Bilateria Unknown 1
Ofu-Mir-133 None MIR-133 UGGUCCC None None CAIIXF020000001.1 12255667 12255728 - Bilateria Bilateria No 1 1
Ofu-Mir-137 None MIR-137 UAUUGCU None None CAIIXF020000001.1 32334650 32334707 - Bilateria Bilateria No 1
Ofu-Mir-153 None MIR-153 UGCAUAG None None CAIIXF020000007.1 29429302 29429359 + Bilateria Bilateria No 1
Ofu-Mir-184 None MIR-184 GGACGGA None None CAIIXF020000007.1 28904670 28904727 + Nephrozoa Nephrozoa No 1
Ofu-Mir-190 None MIR-190 GAUAUGU None None CAIIXF020000007.1 10956612 10956670 + Bilateria Bilateria Unknown
Ofu-Mir-193-P1 None MIR-193 ACUGGCC None None CAIIXF020000009.1 12492400 12492459 - Bilateria Bilateria No 1
Ofu-Mir-210 None MIR-210 UGUGCAU None None CAIIXF020000006.1 15845359 15845418 - Bilateria Bilateria No 1
Ofu-Mir-216-P1 None MIR-216 AAUAUCA None None CAIIXF020000008.1 38329666 38329724 + Nephrozoa Nephrozoa Unknown
Ofu-Mir-216-P2c None MIR-216 AAUCUCA None None CAIIXF020000008.1 38328620 38328677 + Lophotrochozoa Nephrozoa Unknown 1 1
Ofu-Mir-216-P2d None MIR-216 AAUCUCA None None CAIIXF020000008.1 38331176 38331235 + Lophotrochozoa Nephrozoa Unknown
Ofu-Mir-219 None MIR-219 GAACUGU None None CAIIXF020000006.1 26641005 26641065 + Bilateria Bilateria No
Ofu-Mir-242 None MIR-242 UGCGUAG None None CAIIXF020000005.1 7432639 7432697 + Nephrozoa Nephrozoa Unknown
Ofu-Mir-252-P1 None MIR-252 UAAGUAG None None CAIIXF020000005.1 14830434 14830492 - Bilateria Bilateria Unknown
Ofu-Mir-252-P2 None MIR-252 UAAGUAC None None CAIIXF020000005.1 14829054 14829108 - Bilateria Bilateria Unknown 1
Ofu-Mir-277-P22 None MIR-277 AAAUGCA None None CAIIXF020000010.1 35255866 35255921 - O. fusiformis Protostomia No 1 1
Ofu-Mir-277-P23 None MIR-277 AAAUGCA None None CAIIXF020000010.1 35254985 35255041 - O. fusiformis Protostomia No 1
Ofu-Mir-278 None MIR-278 CGGUGGG None None CAIIXF020000012.1 31541537 31541598 + Bilateria Bilateria No
Ofu-Mir-279-o53 None MIR-279 GACUAGA None None CAIIXF020000005.1 28262820 28262871 + O. fusiformis Protostomia No 1 1 1
Ofu-Mir-279-o54 None MIR-279 GACUAGA None None CAIIXF020000005.1 28263645 28263699 + O. fusiformis Protostomia No 1
Ofu-Mir-279-o55 None MIR-279 GACUAGA None None CAIIXF020000005.1 28263348 28263402 + O. fusiformis Protostomia No
Ofu-Mir-279-o56 None MIR-279 GACUAGA None None CAIIXF020000001.1 23396616 23396670 - O. fusiformis Protostomia No 1 1
Ofu-Mir-279-o57 None MIR-279 GACUAGA None None CAIIXF020000005.1 28262369 28262425 + O. fusiformis Protostomia No 1
Ofu-Mir-281 None MIR-281 GUCAUGG None None CAIIXF020000001.1 10627669 10627725 + Nephrozoa Nephrozoa No 1
Ofu-Mir-315 None MIR-315 UUUGAUU None None CAIIXF020000005.1 93052 93109 + Nephrozoa Nephrozoa Unknown 1
Ofu-Mir-317 None MIR-317 GAACACA None None CAIIXF020000010.1 35268805 35268865 - Protostomia Protostomia No 1 1 1
Ofu-Mir-375 None MIR-375 UUGUUCG None None CAIIXF020000005.1 34616123 34616180 + Nephrozoa Nephrozoa No
Ofu-Mir-750 None MIR-750 CAGAUCU None None CAIIXF020000001.1 43127729 43127785 + Protostomia Protostomia No
Ofu-Mir-1175 None MIR-1175 GAGAUUC None None CAIIXF020000001.1 43130572 43130633 + Protostomia Protostomia No 1
Ofu-Mir-1986 None MIR-1986 CAGGGUC None None CAIIXF020000006.1 29788995 29789048 - Lophotrochozoa Lophotrochozoa Unknown 1 1
Ofu-Mir-1989 None MIR-1989 CAGCUGU None None CAIIXF020000006.1 23701222 23701280 - Platytrochozoa Platytrochozoa Unknown 1
Ofu-Mir-1990-P1 None MIR-1990 AAGUUGA None None CAIIXF020000006.1 29792074 29792131 - Lophotrochozoa Lophotrochozoa Unknown 1 1
Ofu-Mir-1990-P2 None MIR-1990 GGGACUA None None CAIIXF020000006.1 29791317 29791373 - Lophotrochozoa Lophotrochozoa No
Ofu-Mir-1992 None MIR-1992 CAGCAGU None None CAIIXF020000007.1 19293990 19294047 - Platytrochozoa Platytrochozoa No 1
Ofu-Mir-1993-P12 None MIR-1993 AUUAUGC None None CAIIXF020000001.1 39666153 39666210 - O. fusiformis Protostomia No
Ofu-Mir-1993-P13 None MIR-1993 CGGGAAU None None CAIIXF020000001.1 8469791 8469848 + O. fusiformis Protostomia No 1
Ofu-Mir-1994-P9 None MIR-1994 GAGACAG None None CAIIXF020000001.1 56576378 56576438 + O. fusiformis Lophotrochozoa No 1
Ofu-Mir-1994-P10 None MIR-1994 GAGACAG None None CAIIXF020000001.1 56578318 56578375 + O. fusiformis Lophotrochozoa No 1 1
Ofu-Mir-1995 None MIR-1995 UACAUUU None None CAIIXF020000001.1 45643035 45643092 + Annelida Annelida Unknown
Ofu-Mir-2001 None MIR-2001 UGUGACC None None CAIIXF020000005.1 14833615 14833672 - Bilateria Bilateria No 1
Ofu-Mir-2692 None MIR-2692 CAGUCAA None None CAIIXF020000006.1 29791862 29791922 - Annelida Annelida No 1 1
Ofu-Novel-1 None OFU-NOVEL-1 AUUGAAC None None CAIIXF020000005.1 17204261 17204318 - O. fusiformis O. fusiformis No 1
Ofu-Novel-2 None OFU-NOVEL-2 GUGGAGA None None CAIIXF020000006.1 22196940 22196999 + O. fusiformis O. fusiformis No
Ofu-Novel-3 None OFU-NOVEL-3 ACUGCAA None None CAIIXF020000005.1 12026764 12026823 + O. fusiformis O. fusiformis No 1 1 1
Ofu-Novel-4 None OFU-NOVEL-4 CUUCAGU None None CAIIXF020000009.1 37179703 37179762 + O. fusiformis O. fusiformis No 1
Ofu-Novel-5 None OFU-NOVEL-5 AGAGUCC None None CAIIXF020000009.1 37180959 37181018 + O. fusiformis O. fusiformis No
Ofu-Novel-6 None OFU-NOVEL-6 GAGGGGC None None CAIIXF020000011.1 22363723 22363778 - O. fusiformis O. fusiformis No 1
Ofu-Novel-7 None OFU-NOVEL-7 GGUGAUA None None CAIIXF020000011.1 26190832 26190890 + O. fusiformis O. fusiformis No
Ofu-Novel-8 None OFU-NOVEL-8 GUCCUAG None None CAIIXF020000058.1 48082 48148 + O. fusiformis O. fusiformis No 1
Ofu-Novel-9 None OFU-NOVEL-9 CGAUUCU None None CAIIXF020000001.1 27118641 27118697 - O. fusiformis O. fusiformis No 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix