| MirGeneDB ID | Ofu-Mir-1995 |
|---|
| Family name |
MIR-1995 (all species) |
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| Species |
Tubeworm (Owenia fusiformis) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Cte-Mir-1995
Efe-Mir-1995-P1
Efe-Mir-1995-P2
Pdu-Mir-1995
Snu-Mir-1995
|
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| Node of Origin (locus) |
Annelida
|
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| Node of Origin (family) |
Annelida
|
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Genome context
(GCA_903813345.2_Owenia) |
CAIIXF020000001.1: 45643035-45643092 [+]
|
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| Seed |
UACAUUU |
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Precursor
(pre-Mir +30nt flank) |
CAUAGUAACUAUAGCAACACCAUAGUAACUAUACAUUUCACAUUGUGACCGUGUCUUGCAAACGACGGUCUCAAGGUAAAAUGUAAUUUUGGUAUGGUUAACGUAGAUACGUUGCUAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAUAGUAACUAUAGCAAC--| G CUA C A U GUCUU
ACCAUA UAA UACAUUU AC UUG GACCGU G
UGGUAU GUU AUGUAAA UG AAC CUGGCA C
AAUCGUUGCAUAGAUGCAAU^ G UUA A G U GCAAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Ofu-Mir-1995_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AUACAUUUCACAUUGUGACCGU -22
Get sequence
|
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| Star sequence |
Ofu-Mir-1995_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
36- GGUCUCAAGGUAAAAUGUAAUU -58
Get sequence
|
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