MirGeneDB 2.1

MirGeneDB ID

Cte-Mir-1995

Family name MIR-1995 (all species)
Seed UACAUCU
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-1995
Paralogues
Orthologues Efe-Mir-1995-P1  Efe-Mir-1995-P2 
Node of Origin (locus) Annelida
Node of Origin (family) Annelida
Genome context
(Capitella_teleta_v1.0)
CAPTEscaffold_394: 114750-114808 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACAGGUCAUCGAAGCAGGGCGAAGUUUUCUGUACAUCUCGCAUUGUGACCAUCUGUUGUUAACGCAUGGUUUCAAUGGGAUAUGUUGAUAAAGCUUCCGUCGAGGUCAACAUCCGAGGC
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Structure
        10         20         30        40        50         
ACAGGUCAUCGAAGCAG-   -|       CUGU    C  G     U      CUGUUG 
                  GGC GAAGUUUU    ACAU UC CAUUG GACCAU      \
                  CUG CUUCGAAA    UGUA AG GUAAC UUGGUA      U
CGGAGCCUACAACUGGAG   C^       UAGU    U  G     U      CGCAAU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Cte-Mir-1995_5p

mirBase accessionMIMAT0009706
Sequence
0- GUACAUCUCGCAUUGUGACCAU -22
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Star sequence

Cte-Mir-1995_3p* (predicted)

mirBase accessionNone
Sequence
37- GGUUUCAAUGGGAUAUGUUGAU -59
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