MirGeneDB 3.0
MirGeneDB ID

Ofu-Mir-1990-P2

Family name MIR-1990 (all species)
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues Ofu-Mir-1990-P1 
Orthologues Agr-Mir-1990-P2  Cte-Mir-1990-P2  Cte-Mir-1990-P2-as  Eba-Mir-1990-P2  Efe-Mir-1990-P2  Hru-Mir-1990-P2  Lan-Mir-1990-P2  Lgi-Mir-1990-P2  Mgi-Mir-1990-P2  Mom-Mir-1990-P2  Npo-Mir-1990-P2  Pdu-Mir-1990-P2  Pdu-Mir-1990-P2-as  Pve-Mir-1990-P2a1  Pve-Mir-1990-P2a2  Pve-Mir-1990-P2b  Pve-Mir-1990-P2c  Pve-Mir-1990-P2d  Pve-Mir-1990-P2e  Rph-Mir-1990-P2  War-Mir-1990-P2 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_903813345.2_Owenia)		 CAIIXF020000006.1: 29791317-29791373 [-]
Clustered miRNAs
(< 50kb from Mir-1990-P2)		 Mir-1986 CAIIXF020000006.1: 29788995-29789048 [-]
Mir-1990-P2 CAIIXF020000006.1: 29791317-29791373 [-]
Mir-2692 CAIIXF020000006.1: 29791862-29791922 [-]
Mir-1990-P1 CAIIXF020000006.1: 29792074-29792131 [-]
Seed GGGACUA
Precursor
(pre-Mir +30nt flank)		 
UGCUAUGGAGACAUCGAGGCGACUCAGGGCAGUAAGUUGAUAUAGUCCCAGGAUCUGAUGCCACCCGGGACUACUUUAACUUACAGCUCGAGAGUCCGCCGUUGAACAGCAUACAGA
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Structure
        10        20          30        40        50        
UGCUAUGGAGACAUCGAG  -     A-|   A         UA       A  AUCUG 
                  GC GACUC  GGGC GUAAGUUGA  UAGUCCC GG     \
                  CG CUGAG  CUCG CAUUCAAUU  AUCAGGG CC     A
AGACAUACGACAAGUUGC  C     AG^   A         UC       C  ACCGU 
     110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Drosha cut -1 on both arms.
3' NTU No
MotifsNo
Tissue expression
- +
To To
Star sequence

Ofu-Mir-1990-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGUAAGUUGAUAUAGUCCCAGG -22
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Mature sequence

Ofu-Mir-1990-P2_3p
mirBase accessionNone
Sequence 
35- CGGGACUACUUUAACUUACAGC -57
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