MirGeneDB 3.0
MirGeneDB ID

Pve-Mir-1990-P2b

Family name MIR-1990 (all species)
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues Pve-Mir-1990-P2a1  Pve-Mir-1990-P2a2  Pve-Mir-1990-P2c  Pve-Mir-1990-P2d  Pve-Mir-1990-P2e 
Orthologues Agr-Mir-1990-P2  Cte-Mir-1990-P2  Cte-Mir-1990-P2-as  Eba-Mir-1990-P2  Efe-Mir-1990-P2  Hru-Mir-1990-P2  Lan-Mir-1990-P2  Lgi-Mir-1990-P2  Mgi-Mir-1990-P2  Mom-Mir-1990-P2  Npo-Mir-1990-P2  Ofu-Mir-1990-P2  Pdu-Mir-1990-P2  Pdu-Mir-1990-P2-as  Rph-Mir-1990-P2  War-Mir-1990-P2 
Node of Origin (locus) Dentaliidae
Node of Origin (family) Lophotrochozoa
Genome context
(Pve_genome_chr_only)		 Pve_Chr2: 352803736-352803791 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1990-P2b)		 Mir-1990-P2e Pve_Chr2: 352798096-352798154 [-] Ensembl
Mir-1990-P2d Pve_Chr2: 352800222-352800278 [-] Ensembl
Mir-1986-P5 Pve_Chr2: 352801286-352801343 [-] Ensembl
Mir-1986-P4 Pve_Chr2: 352801964-352802022 [-] Ensembl
Mir-1990-P2c Pve_Chr2: 352803059-352803115 [-] Ensembl
Mir-1990-P2b Pve_Chr2: 352803736-352803791 [-] Ensembl
Seed GGGACUA
Precursor
(pre-Mir +30nt flank)		 
AACAUACGACAAAUGUGUCCUCUUAUAUGCUGUAAGUUGUUGGGGUCCUCGGUAAAUUUAUUCCAGGGACUACUUCAACUGCAUGCAAAUAAGCUGGACUGAAUCGACGAGAGAGC
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Structure
        10         20         30         40        50       
AACAUACGACAAAUGUG-   U-     A   -|   A    UUGG     UC  UAAA 
                  UCC  CUUAU UGC UGUA GUUG    GGUCC  GG    U
                  AGG  GAAUA ACG ACGU CAAC    UCAGG  CC    U
CGAGAGAGCAGCUAAGUC   UC     A   U^   -    UUCA     GA  UUAU 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Star sequence

Pve-Mir-1990-P2b_5p*
mirBase accessionNone
Sequence 
0- UGUAAGUUGUUGGGGUCCUCGG -22
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Mature sequence

Pve-Mir-1990-P2b_3p
mirBase accessionNone
Sequence 
34- AGGGACUACUUCAACUGCAUGC -56
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