MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-1990-P2

Family name MIR-1990 (all species)
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-1990-P1 
Orthologues Agr-Mir-1990-P2  Cte-Mir-1990-P2  Cte-Mir-1990-P2-as  Eba-Mir-1990-P2  Efe-Mir-1990-P2  Hru-Mir-1990-P2  Lgi-Mir-1990-P2  Mgi-Mir-1990-P2  Mom-Mir-1990-P2  Npo-Mir-1990-P2  Ofu-Mir-1990-P2  Pdu-Mir-1990-P2  Pdu-Mir-1990-P2-as  Pve-Mir-1990-P2a1  Pve-Mir-1990-P2a2  Pve-Mir-1990-P2b  Pve-Mir-1990-P2c  Pve-Mir-1990-P2d  Pve-Mir-1990-P2e  Rph-Mir-1990-P2  War-Mir-1990-P2 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(LinAna_1.0)		 LFEI01000037: 537538-537595 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1990-P2)		 Mir-1986 LFEI01000037: 537094-537148 [-] Ensembl
Mir-1990-P2 LFEI01000037: 537538-537595 [-] Ensembl
Mir-1990-P1 LFEI01000037: 549096-549155 [+] Ensembl
Seed GGGACUA
Precursor
(pre-Mir +30nt flank)		 
AGAUGUACACAGACAUAGGAGGUCUCGCGCUGUAAGUUUACAUAGUCCCAGGUUGUGACGGGUUCCCGGGACUAUGUCAACUUCCAGCUUGGCACCCUUCUCAUCACCACGCACAGUU
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Structure
        10         20         30        40        50        
AGAUGUACACAGACAUA-     UC-|  C    U     U          A  UUGUG 
                  GGAGG   UCG GCUG AAGUU ACAUAGUCCC GG     A
                  CUUCC   GGU CGAC UUCAA UGUAUCAGGG CC     C
UUGACACGCACCACUACU     CAC^  U    C     C          C  UUGGG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To To
Star sequence

Lan-Mir-1990-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGUAAGUUUACAUAGUCCCAGG -22
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Mature sequence

Lan-Mir-1990-P2_3p
mirBase accessionNone
Sequence 
36- CGGGACUAUGUCAACUUCCAGC -58
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