Mir
Gene
DB
2.1
Home
Browse
Search
Download
Information
41 microRNA genes with node of origin Daphnia
Sort by genome coordinates
Motifs
MirGeneDB ID
▲
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Dma-Mir-2-o1
None
MIR-2
AUCACAG
None
None
NC_046175.1
6286723
6286816
-
Daphnia
Protostomia
No
Dpu-Mir-2-o1
None
MIR-2
AUCACAG
None
None
DAPPUscaffold_32
69416
69503
-
Daphnia
Protostomia
No
Dma-Mir-2-o2
None
MIR-2
GAUAAUU
None
None
NC_046178.1
1060033
1060091
-
Daphnia
Protostomia
No
1
Dpu-Mir-2-o2
None
MIR-2
AUCACAG
None
None
DAPPUscaffold_77
78818
78876
-
Daphnia
Protostomia
No
1
Dma-Mir-9-o15
None
MIR-9
CUUUGGU
None
None
NC_046179.1
9004931
9004991
-
Daphnia
Bilateria
No
1
1
1
Dpu-Mir-9-o15
dpu-mir-9
MIR-9
CUUUGGU
MIMAT0012671
None
DAPPUscaffold_2
1526213
1526273
+
Daphnia
Bilateria
No
1
1
1
Dma-Mir-9-o16
None
MIR-9
CUUUGGU
None
None
NC_046175.1
6286883
6286941
-
Daphnia
Bilateria
No
1
Dpu-Mir-9-o16
None
MIR-9
CUUUGGU
None
None
DAPPUscaffold_32
69575
69633
-
Daphnia
Bilateria
No
1
Dma-Mir-87-o5a
None
MIR-87
UGAGCAA
None
None
NC_046176.1
6157349
6157434
-
Daphnia
Protostomia
No
1
Dpu-Mir-87-o5a
None
MIR-87
UGAGCAA
None
None
DAPPUscaffold_1
2190896
2190980
+
Daphnia
Protostomia
No
1
Dma-Mir-87-o5b
None
MIR-87
UGAGCAA
None
None
NC_046176.1
6157168
6157231
-
Daphnia
Protostomia
No
1
Dpu-Mir-87-o5b
None
MIR-87
UGAGCAA
None
None
DAPPUscaffold_1
2191079
2191142
+
Daphnia
Protostomia
No
1
Dma-Mir-92-o46
None
MIR-92
AUUGCAC
None
None
NC_046181.1
7370656
7370733
-
Daphnia
Bilateria
No
1
Dpu-Mir-92-o46
None
MIR-92
AUUGCAC
None
None
DAPPUscaffold_38
876143
876215
+
Daphnia
Bilateria
No
1
Dma-Mir-92-o47
None
MIR-92
AUUGCAC
None
None
NC_046181.1
7370498
7370557
-
Daphnia
Bilateria
No
Dpu-Mir-92-o47
dpu-mir-92
MIR-92
AUUGCAC
None
MIMAT0012672
DAPPUscaffold_38
876332
876391
+
Daphnia
Bilateria
No
Dma-Mir-279-o1
None
MIR-279
GACUAGA
None
None
NC_046175.1
6287015
6287090
-
Daphnia
Protostomia
No
1
1
Dpu-Mir-279-o1
None
MIR-279
GACUAGA
None
None
DAPPUscaffold_32
69703
69769
-
Daphnia
Protostomia
No
1
Dma-Mir-279-o2
None
MIR-279
GACUAGA
None
None
NC_046175.1
6285937
6286000
-
Daphnia
Protostomia
No
1
Dpu-Mir-279-o2
dpu-mir-279b
MIR-279
GACUAGA
None
MIMAT0018923
DAPPUscaffold_32
68663
68726
-
Daphnia
Protostomia
No
1
Dma-Mir-279-o3
None
MIR-279
GACUAGA
None
None
NC_046174.1
9091292
9091368
+
Daphnia
Protostomia
No
1
Dpu-Mir-279-o3
None
MIR-279
GACUAGA
None
None
DAPPUscaffold_43
177095
177172
+
Daphnia
Protostomia
No
1
Dma-Mir-279-o4
None
MIR-279
GACUAGA
None
None
NC_046174.1
9091763
9091828
+
Daphnia
Protostomia
No
1
1
Dpu-Mir-279-o4
dpu-mir-279a
MIR-279
GACUAGA
None
MIMAT0012654
DAPPUscaffold_43
177501
177567
+
Daphnia
Protostomia
No
1
1
Dma-Mir-279-o5
None
MIR-279
GACUAGA
None
None
NC_046179.1
204663
204723
-
Daphnia
Protostomia
No
1
1
Dpu-Mir-279-o5
None
MIR-279
GACUAGA
None
None
DAPPUscaffold_62
283702
283760
-
Daphnia
Protostomia
No
1
1
1
Dma-Mir-279-o6
None
MIR-279
GACUAGA
None
None
NC_046182.1
2914774
2914845
+
Daphnia
Protostomia
No
Dpu-Mir-279-o6
None
MIR-279
GACUAGA
None
None
DAPPUscaffold_63
523653
523745
-
Daphnia
Protostomia
No
Dma-Novel-1
None
DMA-NOVEL-1
GUGAUGU
None
None
NC_046182.1
5639526
5639593
-
Daphnia
Daphnia
No
1
1
Dpu-Novel-1
None
DPU-NOVEL-1
GUGAUGU
None
None
DAPPUscaffold_58
365534
365601
-
Daphnia
Daphnia
No
1
1
Dma-Novel-2
None
DMA-NOVEL-2
CUGGGUU
None
None
NC_046174.1
2509619
2509677
+
Daphnia
Daphnia
No
1
Dpu-Novel-2
None
DPU-NOVEL-2
CUGGGUU
None
None
DAPPUscaffold_24
361300
361359
-
Daphnia
Daphnia
No
1
Dma-Novel-3
None
DMA-NOVEL-3
UGCACUG
None
None
NC_046183.1
5280622
5280684
+
Daphnia
Daphnia
No
Dpu-Novel-3
None
DPU-NOVEL-3
UGCACUG
None
None
DAPPUscaffold_13
1740035
1740097
+
Daphnia
Daphnia
No
1
Dma-Novel-4
None
DMA-NOVEL-4
CUUGGUU
None
None
NC_046174.1
2509231
2509290
+
Daphnia
Daphnia
No
1
1
Dpu-Novel-4
None
DPU-NOVEL-4
CUUGGUU
None
None
DAPPUscaffold_24
361694
361754
-
Daphnia
Daphnia
No
1
1
Dpu-Novel-5
None
DPU-NOVEL-5
ACUGGGU
None
None
DAPPUscaffold_24
361858
361920
-
Daphnia
Daphnia
Unknown
1
Dma-Novel-5-v1
None
DMA-NOVEL-5
ACUGGGU
None
None
NC_046174.1
2509081
2509143
+
Daphnia
Daphnia
No
Dma-Novel-5-v2
None
DMA-NOVEL-5
CUGGGUA
None
None
NC_046174.1
2509081
2509143
+
Daphnia
Daphnia
No
Dma-Novel-6
None
DMA-NOVEL-6
GGGGGAA
None
None
NC_046175.1
6286446
6286507
-
Daphnia
Daphnia
No
Dpu-Novel-6
None
DPU-NOVEL-6
CACUGGG
None
None
CAJVNM010000013.1:1301350-1301500
54
115
+
Daphnia
Daphnia
No
1
Download sequences for:
precursor
|
5p
|
3p
|
mature
|
star
|
mature/star
|
loop
|
extend_pre
|
all