| MirGeneDB ID | Npo-Mir-216-P2d |
|---|---|
| Family name | MIR-216 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | Npo-Mir-216-P2c |
| Orthologues | Aae-Mir-216-P2 Aga-Mir-216-P2 Agr-Mir-216-P2d Asu-Mir-216-P2 Ava-Mir-216-P2 Bfl-Mir-216-P2 Bge-Mir-216-P2 Bko-Mir-216-P2 Bla-Mir-216-P2 Bpl-Mir-216-P2 Cbr-Mir-216-P2 Cel-Mir-216-P2 Csc-Mir-216-P2 Cte-Mir-216-P2d Dan-Mir-216-P2 Dlo-Mir-216-P2 Dma-Mir-216-P2 Dme-Mir-216-P2 Dmo-Mir-216-P2 Dpu-Mir-216-P2 Dsi-Mir-216-P2 Dya-Mir-216-P2 Esc-Mir-216-P2d Hme-Mir-216-P2 Hru-Mir-216-P2d Isc-Mir-216-P2 Lan-Mir-216-P2d1 Lan-Mir-216-P2d2 Lgi-Mir-216-P2d Lhy-Mir-216-P2d Llo-Mir-216-P2d Mgi-Mir-216-P2d Mom-Mir-216-P2d Obi-Mir-216-P2d Ofu-Mir-216-P2d Ovu-Mir-216-P2d Pau-Mir-216-P2d Pca-Mir-216-P2 Pdu-Mir-216-P2d Pve-Mir-216-P2d Rph-Mir-216-P2d Snu-Mir-216-P2d Tca-Mir-216-P2 Tur-Mir-216-P2 |
| Node of Origin (locus) | Lophotrochozoa |
| Node of Origin (family) | Nephrozoa |
| Genome context (GCA_018389105_NPO) |
JACATO010001670.1: 35814-35871 [-] Ensembl |
| Clustered miRNAs (< 50kb from Mir-216-P2d) |
Mir-12
JACATO010001670.1: 34868-34925 [-]
Ensembl
Mir-216-P2d JACATO010001670.1: 35814-35871 [-] Ensembl Mir-216-P2c JACATO010001670.1: 36790-36848 [-] Ensembl |
| Seed | AAUCUCA |
| Precursor (pre-Mir +30nt flank) |
GCAUAUGUACUAUAUAUGUAGGCAUUUGUUUAAUCUCAGCUGGUAAUUAUGAGUUGGGUUGUAUAUCAAGUUACUAGCCGAGAUUAUAUGACUGUCGUACUAACCAGCACGAGGCCCUGet precursor sequence |
| Structure | 10 20 30 40 50 GCAUAUGUACUAUAUAU- -| U UG U A A GUUGGG GUA GGCA U U UAAUCUC GCUGGUAAUU UGA \ CAU CUGU A A AUUAGAG CGAUCAUUGA ACU U UCCCGGAGCACGACCAAU G^ C GU U C - AUAUGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Npo-Mir-216-P2d_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UAAUCUCAGCUGGUAAUUAUGA -22
Get sequence
|
| Star sequence | Npo-Mir-216-P2d_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- AAGUUACUAGCCGAGAUUAUA -58
Get sequence
|
