| MirGeneDB ID | Npo-Mir-216-P2c |
|---|---|
| Family name | MIR-216 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | Npo-Mir-216-P2d |
| Orthologues | Aae-Mir-216-P2 Aga-Mir-216-P2 Agr-Mir-216-P2c Asu-Mir-216-P2 Ava-Mir-216-P2 Bfl-Mir-216-P2 Bge-Mir-216-P2 Bko-Mir-216-P2 Bla-Mir-216-P2 Bpl-Mir-216-P2 Cbr-Mir-216-P2 Cel-Mir-216-P2 Csc-Mir-216-P2 Cte-Mir-216-P2c Dan-Mir-216-P2 Dgr-Mir-216-P2c Dlo-Mir-216-P2 Dma-Mir-216-P2 Dme-Mir-216-P2 Dmo-Mir-216-P2 Dpu-Mir-216-P2 Dsi-Mir-216-P2 Dya-Mir-216-P2 Eba-Mir-216-P2c Efe-Mir-216-P2c Hme-Mir-216-P2 Isc-Mir-216-P2 Lhy-Mir-216-P2c Llo-Mir-216-P2c Mom-Mir-216-P2c Obi-Mir-216-P2c Ofu-Mir-216-P2c Ovu-Mir-216-P2c Pau-Mir-216-P2c Pca-Mir-216-P2 Snu-Mir-216-P2c Tca-Mir-216-P2 Tur-Mir-216-P2 War-Mir-216-P2c |
| Node of Origin (locus) | Lophotrochozoa |
| Node of Origin (family) | Nephrozoa |
| Genome context (GCA_018389105_NPO) |
JACATO010001670.1: 36790-36848 [-] Ensembl |
| Clustered miRNAs (< 50kb from Mir-216-P2c) |
Mir-12
JACATO010001670.1: 34868-34925 [-]
Ensembl
Mir-216-P2d JACATO010001670.1: 35814-35871 [-] Ensembl Mir-216-P2c JACATO010001670.1: 36790-36848 [-] Ensembl |
| Seed | AAUCUCA |
| Precursor (pre-Mir +30nt flank) |
GCUUGGAACCCGAGACCAGAGCUGAUUGUCUAAUCUCAGCUGGUAAAUCUGAGUGGUGCCUGCUCUCAACCUUACCAGCAGAGGUUUGACAAACACUCCUACUGACCACUCAACAGUCUGet precursor sequence |
| Structure | 10 20 30 40 50 GCUUGGAACCCGAGACCA---| C A U A AUC GUGGUG GAG UG UUGUC AAUCUC GCUGGUAA UGA \ CUC AC AACAG UUGGAG CGACCAUU ACU C UCUGACAACUCACCAGUCAUC^ - A U A CCA CUCGUC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Mature sequence | Npo-Mir-216-P2c_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UAAUCUCAGCUGGUAAAUCUGA -22
Get sequence
|
| Star sequence | Npo-Mir-216-P2c_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- AACCUUACCAGCAGAGGUUUGA -59
Get sequence
|
