| MirGeneDB ID | Npo-Mir-12 |
|---|---|
| Family name | MIR-12 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aae-Mir-12 Aga-Mir-12 Agr-Mir-12 Ava-Mir-12 Bge-Mir-12 Bko-Mir-12 Bpl-Mir-12 Csc-Mir-12 Cte-Mir-12 Dan-Mir-12 Dgr-Mir-12 Dlo-Mir-12 Dma-Mir-12 Dme-Mir-12 Dmo-Mir-12 Dpu-Mir-12 Dsi-Mir-12 Eba-Mir-12 Efe-Mir-12-P1 Efe-Mir-12-P2 Egr-Mir-12 Esc-Mir-12 Gpa-Mir-12 Gsp-Mir-12 Hme-Mir-12 Hru-Mir-12 Isc-Mir-12 Lan-Mir-12-P3 Lan-Mir-12-P4 Lgi-Mir-12 Lhy-Mir-12 Llo-Mir-12 Lpo-Mir-12-P5 Lpo-Mir-12-P6 Lpo-Mir-12-P7 Lpo-Mir-12-P8 Mgi-Mir-12 Mom-Mir-12 Ofu-Mir-12 Ovu-Mir-12 Pau-Mir-12 Pca-Mir-12-P12 Pca-Mir-12-P13 Pcr-Mir-12 Pdu-Mir-12 Pve-Mir-12 Rph-Mir-12 Sme-Mir-12-P9 Sme-Mir-12-P10 Sme-Mir-12-P11 Snu-Mir-12 Tca-Mir-12 Tur-Mir-12-P14 Tur-Mir-12-P15 War-Mir-12 |
| Node of Origin (locus) | Protostomia |
| Node of Origin (family) | Protostomia |
| Genome context (GCA_018389105_NPO) |
JACATO010001670.1: 34868-34925 [-] Ensembl |
| Clustered miRNAs (< 50kb from Mir-12) |
Mir-12
JACATO010001670.1: 34868-34925 [-]
Ensembl
Mir-216-P2d JACATO010001670.1: 35814-35871 [-] Ensembl Mir-216-P2c JACATO010001670.1: 36790-36848 [-] Ensembl |
| Seed | GAGUAUU |
| Precursor (pre-Mir +30nt flank) |
AUCCAUCUGCUGACUGUGGUCUACAACCUGUGAGUAUUACAUCAGGUACUGAUAAUUUAUCCAAUCAGUACCUUUUGUGAUAUUCGUAGCUUGUACAUCCUUUCCAACUUGUUUGUUUGet precursor sequence |
| Structure | 10 20 30 40 50 AUCCAUCUGCUGACUGU- UC-| C UC UAAUU GG UACAA CUGUGAGUAUUACA AGGUACUGA U CC AUGUU GAUGCUUAUAGUGU UCCAUGACU A UUUGUUUGUUCAACCUUU UAC^ C UU AACCU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Npo-Mir-12_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGAGUAUUACAUCAGGUACUGA -22
Get sequence
|
| Star sequence | Npo-Mir-12_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- AGUACCUUUUGUGAUAUUCGUA -58
Get sequence
|
