MirGeneDB 3.0
MirGeneDB ID

Tur-Mir-12-P15

Family name MIR-12 (all species)
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID tur-mir-12b
Paralogues Tur-Mir-12-P14 
Orthologues Aae-Mir-12  Aga-Mir-12  Agr-Mir-12  Ava-Mir-12  Bge-Mir-12  Bko-Mir-12  Bpl-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dgr-Mir-12  Dlo-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Eba-Mir-12  Egr-Mir-12  Esc-Mir-12  Gpa-Mir-12  Gsp-Mir-12  Hme-Mir-12  Hru-Mir-12  Isc-Mir-12  Lgi-Mir-12  Lhy-Mir-12  Llo-Mir-12  Mgi-Mir-12  Mom-Mir-12  Npo-Mir-12  Ofu-Mir-12  Ovu-Mir-12  Pau-Mir-12  Pcr-Mir-12  Pdu-Mir-12  Pve-Mir-12  Rph-Mir-12  Snu-Mir-12  Tca-Mir-12  War-Mir-12 
Node of Origin (locus) T. urticae
Node of Origin (family) Protostomia
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)		 HE587311.1: 1901159-1901218 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-12-P15)		 Mir-12-P15 HE587311.1: 1901159-1901218 [-] Ensembl
Mir-216-P2 HE587311.1: 1901303-1901367 [-] Ensembl
Seed GAGUAUU
Precursor
(pre-Mir +30nt flank)		 
UCACUUAGCAAACCAUGGAUGCACAAGAGGUGAGUAUUUCUCCAGGUACUGAUGAGUUGAGUUGAUUAGUACCUGGAAAAUUAACUCACCUCUUGUUGUAUCAUUAUUCAACUUGUUAUC
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Structure
        10         20         30          40        50         
UCACUUAGCAAACCAUG-     -             --|   C            UGAGUU 
                  GAUGC ACAAGAGGUGAGU  AUUU UCCAGGUACUGA      \
                  CUAUG UGUUCUCCACUCA  UAAA AGGUCCAUGAUU      G
CUAUUGUUCAACUUAUUA     U             AU^   -            AGUUGA 
.       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
CommentThere are Dicer cuts -1 and -2 on both arms.
3' NTU No
MotifsNo
Tissue expression
- +
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Mature sequence

Tur-Mir-12-P15_5p
mirBase accessionMIMAT0023044
Sequence 
0- UGAGUAUUUCUCCAGGUACUGA -22
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Star sequence

Tur-Mir-12-P15_3p*
mirBase accessionMIMAT0023045
Sequence 
37- AGUACCUGGAAAAUUAACUCACC -60
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