MirGeneDB 3.0
84 Tetranychus urticae microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Ad Ad Ad Ad Ad Em To
Tur-Bantam None BANTAM GAGAUCA None None HE587306.1 2889816 2889879 - Protostomia Protostomia No 1
Tur-Let-7 None LET-7 GAGGUAG None None HE587316.1 480736 480809 + Bilateria Bilateria Unknown 1
Tur-Mir-1 tur-mir-1 MIR-1 GGAAUGU MIMAT0023094 MIMAT0023095 HE587326.1 697265 697325 + Bilateria Bilateria No 1
Tur-Mir-2-o142a tur-mir-2-1 MIR-2 AUCACAG MIMAT0023042 MIMAT0023043 HE587310.1 2525606 2525669 + T. urticae Protostomia No
Tur-Mir-2-o142b tur-mir-2-2 MIR-2 AUCACAG MIMAT0023042 MIMAT0023043 HE587310.1 2523054 2523117 - T. urticae Protostomia No
Tur-Mir-2-o143 None MIR-2 AUCACAG None None HE587302.1 3261040 3261110 + T. urticae Protostomia No 1
Tur-Mir-7-P28 tur-mir-7 MIR-7 GGAAGAC MIMAT0023036 MIMAT0023037 HE587302.1 1216514 1216576 - T. urticae Bilateria No 1
Tur-Mir-7-P29 None MIR-7 GGAAGAC None None HE587312.1 2160396 2160460 - T. urticae Bilateria Unknown 1 1
Tur-Mir-8 None MIR-8 AAUACUG None None HE587312.1 342369 342432 + Nephrozoa Nephrozoa No
Tur-Mir-9-P39a tur-mir-9-1 MIR-9 CUUUGGU MIMAT0023082 MIMAT0023083 HE587301.1 1879586 1879648 + Bilateria Bilateria No 1 1
Tur-Mir-9-P39b tur-mir-9-2 MIR-9 CUUUGGU MIMAT0023082 MIMAT0023083 HE587301.1 1878278 1878340 - Bilateria Bilateria No 1 1
Tur-Mir-10-P1y None MIR-10 CUCUGUA None None HE587311.1 780226 780287 - T. urticae Eumetazoa No 1
Tur-Mir-10-P1z V tur-mir-10 MIR-10 CCCUGUA MIMAT0023026 MIMAT0023027 HE587320.1 1111621 1111681 + T. urticae Eumetazoa 2 No
Tur-Mir-10-P2 None MIR-10 ACCCGUA None None HE587316.1 479982 480084 + Bilateria Eumetazoa No 1
Tur-Mir-10-P4u tur-mir-993b MIR-10 ACCCUGU MIMAT0023052 MIMAT0023053 HE587311.1 2466151 2466214 - T. urticae Eumetazoa No
Tur-Mir-10-P4v tur-mir-993a-2 MIR-10 ACCCUGU MIMAT0023058 MIMAT0023059 HE587311.1 2465365 2465427 - T. urticae Eumetazoa No 1
Tur-Mir-10-P4w tur-mir-993a-1 MIR-10 ACCCUGU MIMAT0023058 MIMAT0023059 HE587311.1 2464812 2464873 - T. urticae Eumetazoa No
Tur-Mir-12-P14 tur-mir-12a MIR-12 GAGUAUU MIMAT0023102 MIMAT0023103 HE587328.1 1008240 1008300 + T. urticae Protostomia No 1
Tur-Mir-12-P15 tur-mir-12b MIR-12 GAGUAUU MIMAT0023044 MIMAT0023045 HE587311.1 1901159 1901218 - T. urticae Protostomia No
Tur-Mir-22-P2 tur-mir-745 MIR-22 AGCUGCC MIMAT0023048 MIMAT0023049 HE587308.1 2281016 2281101 + Bilateria Bilateria No
Tur-Mir-29-P1 None MIR-29 AGCACCA None None HE587328.1 416806 416867 - Bilateria Bilateria No 1
Tur-Mir-34 tur-mir-34 MIR-34 GGCAGUG MIMAT0023096 MIMAT0023097 HE587302.1 4478347 4478406 + Bilateria Bilateria No 1
Tur-Mir-36-P30 None MIR-36 GGUGGCU None None HE587309.1 1096172 1096231 + T. urticae Protostomia No 1
Tur-Mir-36-P31 None MIR-36 GGUGGCU None None HE587309.1 1096273 1096332 + T. urticae Protostomia No 1
Tur-Mir-36-P32 None MIR-36 GGUGGCU None None HE587309.1 1096476 1096535 + T. urticae Protostomia No 1
Tur-Mir-36-P33 None MIR-36 GGUGGCU None None HE587309.1 1096578 1096637 + T. urticae Protostomia No 1
Tur-Mir-36-P34 None MIR-36 GGUGGCU None None HE587309.1 1096882 1096941 + T. urticae Protostomia No 1
Tur-Mir-36-P35 None MIR-36 GGUGGCU None None HE587309.1 1096984 1097043 + T. urticae Protostomia No 1
Tur-Mir-36-P36 None MIR-36 CACCGGG None None HE587309.1 1097086 1097144 + T. urticae Protostomia No 1
Tur-Mir-67 tur-mir-307 MIR-67 CACAACC MIMAT0023068 MIMAT0023069 HE587317.1 880795 880871 - Protostomia Protostomia No 1 1
Tur-Mir-71-P6a tur-mir-71-1 MIR-71 CUCACUA MIMAT0023040 MIMAT0023041 HE587310.1 2524818 2524890 + T. urticae Nephrozoa No 1
Tur-Mir-71-P6b tur-mir-71-2 MIR-71 CUCACUA MIMAT0023040 MIMAT0023041 HE587310.1 2523836 2523908 - T. urticae Nephrozoa No 1
Tur-Mir-76 None MIR-76 UCGUUGU None None gb|CM077717.1|:17556145-17556464 80 232 + Nephrozoa Nephrozoa No 1
Tur-Mir-87-o38 None MIR-87 UGAGCAA None None HE587301.1 4415425 4415497 - T. urticae Protostomia No 1
Tur-Mir-87-o39 tur-mir-87 MIR-87 AGCCGGA MIMAT0023066 MIMAT0023067 HE587301.1 4415225 4415289 - T. urticae Protostomia No 1
Tur-Mir-87-o40 None MIR-87 UGAGCAA None None HE587301.1 4415090 4415158 - T. urticae Protostomia No 1
Tur-Mir-87-o41 None MIR-87 UGAGCAA None None HE587301.1 4414906 4414965 - T. urticae Protostomia No
Tur-Mir-92-P21 None MIR-92 AUUGCAC None None HE587307.1 1360151 1360224 + T. urticae Bilateria No
Tur-Mir-92-P22 None MIR-92 AUUGCAC None None HE587304.1 3805132 3805205 - T. urticae Bilateria No
Tur-Mir-92-P23 tur-mir-92 MIR-92 AUUGCAC MIMAT0023086 MIMAT0023087 HE587317.1 1593042 1593106 + T. urticae Bilateria No
Tur-Mir-96-P2 tur-mir-263b MIR-96 UUGGCAC MIMAT0023108 MIMAT0023109 HE587335.1 152007 152070 - Bilateria Bilateria No
Tur-Mir-96-P3 tur-mir-263a MIR-96 AUGGCAC MIMAT0023112 MIMAT0023113 HE587335.1 152638 152699 - Bilateria Bilateria No 1
Tur-Mir-124-P46 tur-mir-124-1 MIR-124 AAGGCAC MIMAT0023088 MIMAT0023089 HE587309.1 2159035 2159097 + T. urticae Bilateria No
Tur-Mir-124-P47 tur-mir-124-2 MIR-124 AAGGCAC MIMAT0026457 MIMAT0023089 HE587309.1 2159846 2159908 + T. urticae Bilateria No 1
Tur-Mir-133 tur-mir-133 MIR-133 UGGUCCC MIMAT0023080 MIMAT0023081 HE587302.1 2687363 2687442 + Bilateria Bilateria No 1
Tur-Mir-137 tur-mir-137 MIR-137 GUAUUCC MIMAT0023098 MIMAT0023099 HE587323.1 1210039 1210104 + Bilateria Bilateria No 1 1
Tur-Mir-153 None MIR-153 UGCAUAG None None HE587303.1 4160352 4160418 + Bilateria Bilateria No 1
Tur-Mir-184 tur-mir-184 MIR-184 GGACGGA MIMAT0023072 MIMAT0023073 HE587310.1 1724590 1724655 - Nephrozoa Nephrozoa No 1
Tur-Mir-190 tur-mir-190 MIR-190 GAUAUGU MIMAT0023084 MIMAT0023085 HE587310.1 790352 790416 + Bilateria Bilateria No
Tur-Mir-210-P21 None MIR-210 UGUGCGU None None HE587323.1 68257 68325 + T. urticae Bilateria No 1 1
Tur-Mir-210-P22 None MIR-210 UGUGCGU None None HE587323.1 74280 74348 - T. urticae Bilateria No 1 1
Tur-Mir-216-P2 tur-mir-5737 MIR-216 AAUCUCA MIMAT0023104 MIMAT0023105 HE587311.1 1901303 1901367 - Nephrozoa Nephrozoa Unknown 1
Tur-Mir-219 None MIR-219 GAUUGUC None None HE587305.1 3464891 3464953 - Bilateria Bilateria No
Tur-Mir-252-P1 None MIR-252 UAAGUAG None None HE587309.1 1327878 1328002 + Bilateria Bilateria No
Tur-Mir-252-P2 V tur-mir-252 MIR-252 UAAGUAC MIMAT0023076 MIMAT0023077 HE587307.1 717896 717972 - Bilateria Bilateria 2 Unknown 1
Tur-Mir-276 tur-mir-276 MIR-276 AGGAACU MIMAT0023034 MIMAT0023035 HE587306.1 1311432 1311494 + Arthropoda Arthropoda No 1 1
Tur-Mir-277 None MIR-277 AAAUGCA None None HE587302.1 4477146 4477214 + Protostomia Protostomia No
Tur-Mir-278 tur-mir-278 MIR-278 CGGUGGG MIMAT0023030 MIMAT0023031 HE587301.1 5514204 5514268 + Bilateria Bilateria No
Tur-Mir-279-P26 None MIR-279 GACUAGA None None HE587309.1 1091933 1091994 + T. urticae Protostomia No 1 1 1
Tur-Mir-279-P27a tur-mir-279 MIR-279 GACUAGA MIMAT0023106 MIMAT0023107 HE587308.1 2468600 2468662 - T. urticae Protostomia No
Tur-Mir-279-P27b tur-mir-279 MIR-279 GACUAGA MIMAT0023106 MIMAT0023107 HE587308.1 2463767 2463829 - T. urticae Protostomia No
Tur-Mir-281 tur-mir-281 MIR-281 AGAGAGC MIMAT0023046 MIMAT0023047 HE587305.1 3874609 3874669 + Nephrozoa Nephrozoa No 1 1
Tur-Mir-305 tur-mir-305 MIR-305 UUGUACU MIMAT0023114 MIMAT0023115 HE587305.1 3433624 3433695 + Cryptovermes Cryptovermes No 1
Tur-Mir-315 None MIR-315 UUUGAUU None None HE587327.1 742314 742406 - Nephrozoa Nephrozoa No
Tur-Mir-317 tur-mir-317 MIR-317 GAACACA MIMAT0023060 MIMAT0023061 HE587302.1 4474819 4474887 + Protostomia Protostomia No 1
Tur-Mir-375 None MIR-375 UUGUUCG None None HE587325.1 499265 499498 - Nephrozoa Nephrozoa No
Tur-Mir-750 None MIR-750 CAGAUCU None None HE587319.1 654152 654217 - Protostomia Protostomia No
Tur-Mir-1175 V None MIR-1175 GAGAUUC None None HE587319.1 654009 654071 - Protostomia Protostomia 2 No 1
Tur-Mir-1993 None MIR-1993 AUUAUGC None None HE587302.1 2071519 2071583 + Protostomia Protostomia No
Tur-Mir-2001 None MIR-2001 UGUGACC None None HE587309.1 1324887 1324960 + Bilateria Bilateria No 1
Tur-Mir-3931 tur-mir-3931 MIR-3931 ACUUUGA MIMAT0023090 MIMAT0023091 HE587302.1 3048006 3048067 - Chelicerata Chelicerata No 1
Tur-Mir-5731-P1a tur-mir-5731 MIR-5731 UGGGCAC MIMAT0023056 MIMAT0023057 HE587494.1 1952 2039 - T. urticae T. urticae No 1 1
Tur-Mir-5731-P1b tur-mir-5731 MIR-5731 UGGGCAC MIMAT0023056 MIMAT0023057 HE587494.1 6201 6288 - T. urticae T. urticae No 1 1
Tur-Mir-5731-P1c tur-mir-5731 MIR-5731 UGGGCAC MIMAT0023056 MIMAT0023057 HE587301.1 1420763 1420850 - T. urticae T. urticae No 1 1
Tur-Mir-5733 tur-mir-5733 MIR-5733 ACUUGAU MIMAT0023064 MIMAT0023065 HE587301.1 1416967 1417036 - T. urticae T. urticae No 1
Tur-Mir-5734 tur-mir-5734 MIR-5734 UGGGGUA MIMAT0023074 MIMAT0023075 HE587301.1 1423018 1423077 - T. urticae T. urticae No
Tur-Mir-5735 tur-mir-5735 MIR-5735 GGACAAC MIMAT0023092 MIMAT0023093 HE587314.1 1981826 1981884 + Chelicerata Chelicerata No 1
Tur-Mir-5736 V tur-mir-5736a MIR-5736 UUCGCCA MIMAT0023100 MIMAT0023101 HE587301.1 1424674 1424736 - T. urticae T. urticae 2 No
Tur-Mir-5738 tur-mir-5738 MIR-5738 AUGUAAU MIMAT0023110 MIMAT0023111 HE587302.1 4314298 4314360 - T. urticae T. urticae No
Tur-Novel-1 None TUR-NOVEL-1 CGGAUUG None None HE587302.1 6079671 6079731 + T. urticae T. urticae No
Tur-Novel-2 None TUR-NOVEL-2 UCACAAC None None HE587314.1 2074896 2074957 + T. urticae T. urticae No
Tur-Novel-3 None TUR-NOVEL-3 AUAAAAU None None HE587303.1 2777364 2777427 + T. urticae T. urticae No
Tur-Novel-4 None TUR-NOVEL-4 AGGAAAG None None HE587327.1 533052 533118 + T. urticae T. urticae No
Tur-Novel-5 None TUR-NOVEL-5 ACCGGGA None None HE587309.1 1096052 1096111 + T. urticae T. urticae No 1 1

(red - mature/co-mature, blue - star)

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