Mir-22-P2

MirGeneDB ID

Tur-Mir-22-P2

Family name

MIR-22 (all species)

Species

Two-spotted spider mite (Tetranychus urticae)

MiRBase ID

tur-mir-745

Paralogues

Orthologues

Aae-Mir-22-P2 Aga-Mir-22-P2 Agr-Mir-22-P2 Asu-Mir-22-P2 Bfl-Mir-22-P2a Bfl-Mir-22-P2b Bfl-Mir-22-P2c Bge-Mir-22-P2 Bla-Mir-22-P2a Bla-Mir-22-P2b Bla-Mir-22-P2c Cbr-Mir-22-P2-v1 Cel-Mir-22-P2 Csc-Mir-22-P2 Cte-Mir-22-P2 Dan-Mir-22-P2 Dlo-Mir-22-P2 Dma-Mir-22-P2 Dme-Mir-22-P2 Dmo-Mir-22-P2 Dpu-Mir-22-P2 Dsi-Mir-22-P2 Dya-Mir-22-P2 Eba-Mir-22-P2 Esc-Mir-22-P2 Gpa-Mir-22-P2 Hme-Mir-22-P2 Hru-Mir-22-P2 Isc-Mir-22-P2 Lan-Mir-22-P2 Lgi-Mir-22-P2 Lhy-Mir-22-P2 Llo-Mir-22-P2 Lpo-Mir-22-P2f Lpo-Mir-22-P2g Lpo-Mir-22-P2h Lpo-Mir-22-P2i Mgi-Mir-22-P2 Mom-Mir-22-P2 Npo-Mir-22-P2 Ofu-Mir-22-P2j Ofu-Mir-22-P2k Ovu-Mir-22-P2 Pau-Mir-22-P2 Pca-Mir-22-P2 Pcr-Mir-22-P2l Pcr-Mir-22-P2m Pdu-Mir-22-P2 Pfl-Mir-22-P2 Pmi-Mir-22-P2 Pve-Mir-22-P2 Rph-Mir-22-P2 Sko-Mir-22-P2 Snu-Mir-22-P2 Spu-Mir-22-P2 Tca-Mir-22-P2-v1 War-Mir-22-P2 Xbo-Mir-22-P2d Xbo-Mir-22-P2e

Node of Origin (locus)

Bilateria

Node of Origin (family)

Bilateria

Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)

HE587308.1: 2281016-2281101 [+] Ensembl

Seed

AGCUGCC

Precursor
(pre-Mir +30nt flank)

UGGAAUUAUCAAUUUAAUCAAGGAAGGAUUAGUCCGUCUCUGGGCUGCAAGGCUUAAUUGCAAUUUAUUUUGAAUAGCAAUGAAGUUGAAAUGCCAGCUGCCCAGUGAAGGGCUGUUUACUCCUUGAAUCAAUUCAUCGAAGUUAU

Get precursor sequence

Structure

        10          20        30        40        50        60        70   
UGGAAUUAUCAAUUUAA--|      AG  U      G  U      U  AA   UUAAUUGCAAUUUAUUUUG 
                   UCAAGGA  GA UAGUCC UC CUGGGC GC  GGC                   \
                   AGUUCCU  UU GUCGGG AG GACCCG CG  CCG                   A
UAUUGAAGCUACUUAACUA^      CA  U      A  U      U  A-   UAAAGUUGAAGUAACGAUA 
    140       130       120       110       100         90        80