| MirGeneDB ID | Npo-Mir-22-P2 |
|---|---|
| Family name | MIR-22 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | Npo-Mir-22-P1 |
| Orthologues | Aae-Mir-22-P2 Aga-Mir-22-P2 Agr-Mir-22-P2 Asu-Mir-22-P2 Bfl-Mir-22-P2a Bfl-Mir-22-P2b Bfl-Mir-22-P2c Bge-Mir-22-P2 Bla-Mir-22-P2a Bla-Mir-22-P2b Bla-Mir-22-P2c Cbr-Mir-22-P2-v1 Cel-Mir-22-P2 Csc-Mir-22-P2 Cte-Mir-22-P2 Dan-Mir-22-P2 Dlo-Mir-22-P2 Dma-Mir-22-P2 Dme-Mir-22-P2 Dmo-Mir-22-P2 Dpu-Mir-22-P2 Dsi-Mir-22-P2 Dya-Mir-22-P2 Eba-Mir-22-P2 Esc-Mir-22-P2 Gpa-Mir-22-P2 Hme-Mir-22-P2 Hru-Mir-22-P2 Isc-Mir-22-P2 Lan-Mir-22-P2 Lgi-Mir-22-P2 Lhy-Mir-22-P2 Llo-Mir-22-P2 Lpo-Mir-22-P2f Lpo-Mir-22-P2g Lpo-Mir-22-P2h Lpo-Mir-22-P2i Mgi-Mir-22-P2 Mom-Mir-22-P2 Ofu-Mir-22-P2j Ofu-Mir-22-P2k Ovu-Mir-22-P2 Pau-Mir-22-P2 Pca-Mir-22-P2 Pcr-Mir-22-P2l Pcr-Mir-22-P2m Pdu-Mir-22-P2 Pfl-Mir-22-P2 Pmi-Mir-22-P2 Pve-Mir-22-P2 Rph-Mir-22-P2 Sko-Mir-22-P2 Snu-Mir-22-P2 Spu-Mir-22-P2 Tca-Mir-22-P2-v1 Tur-Mir-22-P2 War-Mir-22-P2 Xbo-Mir-22-P2d Xbo-Mir-22-P2e |
| Node of Origin (locus) | Bilateria |
| Node of Origin (family) | Bilateria |
| Genome context (GCA_018389105_NPO) |
JACATO010000578.1: 916031-916089 [+] Ensembl |
| Clustered miRNAs (< 50kb from Mir-22-P2) |
Mir-22-P1
JACATO010000578.1: 913063-913120 [+]
Ensembl
Mir-22-P2 JACATO010000578.1: 916031-916089 [+] Ensembl |
| Seed | AGCUGCC |
| Precursor (pre-Mir +30nt flank) |
UAGAGCUGGGAAUCAUCGGUAGCCUACUACAGCUCUUCUCUUGGUCAGCUUUCUCUGUAUGUACUGAGAGCUGCCAAAUGAAGGGCUGUGCUGGGUUUUACUACUCAAGUGUUCCUCUAGet precursor sequence |
| Structure | 10 20 30 40 50 UAGAGCUGGGAAUCAUCG --| C UC U UCUGU GUA GCCUA UACAGCUCUUC UUGG CAGCUUUC A CAU UGGGU GUGUCGGGAAG AACC GUCGAGAG U AUCUCCUUGUGAACUCAU UU^ C UA - UCAUG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Npo-Mir-22-P2_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AGCUCUUCUCUUGGUCAGCUUUC -23
Get sequence
|
| Mature sequence | Npo-Mir-22-P2_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- GAGCUGCCAAAUGAAGGGCUGU -59
Get sequence
|
