MirGeneDB ID | Npo-Mir-22-P2 |
---|---|
Family name | MIR-22 (all species) |
Seed | AGCUGCC |
Species | Chambered Nautilus (Nautilus pompilius) |
MiRBase ID | |
Paralogues | Npo-Mir-22-P1 |
Orthologues | Aae-Mir-22-P2 Asu-Mir-22-P2 Bge-Mir-22-P2 Cbr-Mir-22-P2-v1 Cbr-Mir-22-P2-v2 Cel-Mir-22-P2 Cgi-Mir-22-P2 Csc-Mir-22-P2 Cte-Mir-22-P2 Dan-Mir-22-P2 Dma-Mir-22-P2 Dme-Mir-22-P2 Dmo-Mir-22-P2 Dpu-Mir-22-P2 Dsi-Mir-22-P2 Dya-Mir-22-P2 Esc-Mir-22-P2 Hme-Mir-22-P2 Isc-Mir-22-P2 Lan-Mir-22-P2 Lgi-Mir-22-P2 Lpo-Mir-22-P2a Lpo-Mir-22-P2b Lpo-Mir-22-P2c Lpo-Mir-22-P2d Ovu-Mir-22-P2 Pfl-Mir-22-o2 Pmi-Mir-22-o2 Sko-Mir-22-o2 Spu-Mir-22-o2 Tca-Mir-22-P2-v1 Tca-Mir-22-P2-v2 |
Node of Origin (locus) | Bilateria |
Node of Origin (family) | Bilateria |
Genome context (GCA_018389105_NPO) |
JACATO010000578.1: 916031-916089 [+] Ensembl |
Precursor (pre-Mir +30nt flank) | UAGAGCUGGGAAUCAUCGGUAGCCUACUACAGCUCUUCUCUUGGUCAGCUUUCUCUGUAUGUACUGAGAGCUGCCAAAUGAAGGGCUGUGCUGGGUUUUACUACUCAAGUGUUCCUCUAGet precursor sequence |
Structure | 10 20 30 40 50 UAGAGCUGGGAAUCAUCG --| C UC U UCUGU GUA GCCUA UACAGCUCUUC UUGG CAGCUUUC A CAU UGGGU GUGUCGGGAAG AACC GUCGAGAG U AUCUCCUUGUGAACUCAU UU^ C UA - UCAUG 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | No |
Star sequence | Npo-Mir-22-P2_5p* (predicted) |
mirBase accession | None |
Sequence |
0- AGCUCUUCUCUUGGUCAGCUUUC -23
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|
Mature sequence | Npo-Mir-22-P2_3p (predicted) |
mirBase accession | None |
Sequence |
37- GAGCUGCCAAAUGAAGGGCUGU -59
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|