Mir-22-P2

MirGeneDB ID

Dsi-Mir-22-P2

Family name

MIR-22 (all species)

Species

Fruit fly (Drosophila simulans)

MiRBase ID

dsi-mir-980

Paralogues

Orthologues

Aae-Mir-22-P2 Aga-Mir-22-P2 Agr-Mir-22-P2 Asu-Mir-22-P2 Bfl-Mir-22-P2a Bfl-Mir-22-P2b Bfl-Mir-22-P2c Bge-Mir-22-P2 Bla-Mir-22-P2a Bla-Mir-22-P2b Bla-Mir-22-P2c Cbr-Mir-22-P2-v1 Cel-Mir-22-P2 Csc-Mir-22-P2 Cte-Mir-22-P2 Dan-Mir-22-P2 Dlo-Mir-22-P2 Dma-Mir-22-P2 Dme-Mir-22-P2 Dmo-Mir-22-P2 Dpu-Mir-22-P2 Dya-Mir-22-P2 Eba-Mir-22-P2 Esc-Mir-22-P2 Gpa-Mir-22-P2 Hme-Mir-22-P2 Hru-Mir-22-P2 Isc-Mir-22-P2 Lan-Mir-22-P2 Lgi-Mir-22-P2 Lhy-Mir-22-P2 Llo-Mir-22-P2 Lpo-Mir-22-P2f Lpo-Mir-22-P2g Lpo-Mir-22-P2h Lpo-Mir-22-P2i Mgi-Mir-22-P2 Mom-Mir-22-P2 Npo-Mir-22-P2 Ofu-Mir-22-P2j Ofu-Mir-22-P2k Ovu-Mir-22-P2 Pau-Mir-22-P2 Pca-Mir-22-P2 Pcr-Mir-22-P2l Pcr-Mir-22-P2m Pdu-Mir-22-P2 Pfl-Mir-22-P2 Pmi-Mir-22-P2 Pve-Mir-22-P2 Rph-Mir-22-P2 Sko-Mir-22-P2 Snu-Mir-22-P2 Spu-Mir-22-P2 Tca-Mir-22-P2-v1 Tur-Mir-22-P2 War-Mir-22-P2 Xbo-Mir-22-P2d Xbo-Mir-22-P2e

Node of Origin (locus)

Bilateria

Node of Origin (family)

Bilateria

Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)

X: 113167-113233 [-] UCSC Ensembl

Seed

AGCUGCC

Precursor
(pre-Mir +30nt flank)

GCGUGUGAAAUACGAAGUUGAUUGUAUGUCAGUUUUUCAUUUGGCGUGGCUAGCUCACUACUUUUUUAAUAUUGCUAGCUGCCUUGUGAAGGGCUUACGUGUAAUUGCAGUUCAACUGCCAAAUAAU

Get precursor sequence

Structure

        10          20        30        40        50        60    
GCGUGUGAAAUACGAAGUU--|         C          UU   GU       UCACUACUU 
                     GAUUGUAUGU AGUUUUUCAU  GGC  GGCUAGC         \
                     UUAAUGUGCA UCGGGAAGUG  CCG  UCGAUCG         U
UAAUAAACCGUCAACUUGACG^         U          UU   --       UUAUAAUUU 
     120       110       100        90          80        70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

He	Wh

Star sequence

Dsi-Mir-22-P2_5p*

mirBase accession

MIMAT0012481

Sequence

0- AGUUUUUCAUUUGGCGUGGCUAGC -24

Get sequence

Mature sequence

Dsi-Mir-22-P2_3p

mirBase accession

MIMAT0012482

Sequence

45- UAGCUGCCUUGUGAAGGGCUUA -67

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