MirGeneDB 3.0
MirGeneDB ID

Mgi-Mir-22-P2

Family name MIR-22 (all species)
Species Pacific oyster (Magallana gigas)
MiRBase ID
Paralogues Mgi-Mir-22-P1 
Orthologues Aae-Mir-22-P2  Aga-Mir-22-P2  Agr-Mir-22-P2  Asu-Mir-22-P2  Bfl-Mir-22-P2a  Bfl-Mir-22-P2b  Bfl-Mir-22-P2c  Bge-Mir-22-P2  Bla-Mir-22-P2a  Bla-Mir-22-P2b  Bla-Mir-22-P2c  Cbr-Mir-22-P2-v1  Cel-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dlo-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Eba-Mir-22-P2  Esc-Mir-22-P2  Gpa-Mir-22-P2  Hme-Mir-22-P2  Hru-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lhy-Mir-22-P2  Llo-Mir-22-P2  Lpo-Mir-22-P2f  Lpo-Mir-22-P2g  Lpo-Mir-22-P2h  Lpo-Mir-22-P2i  Mom-Mir-22-P2  Npo-Mir-22-P2  Ofu-Mir-22-P2j  Ofu-Mir-22-P2k  Ovu-Mir-22-P2  Pau-Mir-22-P2  Pca-Mir-22-P2  Pcr-Mir-22-P2l  Pcr-Mir-22-P2m  Pdu-Mir-22-P2  Pfl-Mir-22-P2  Pmi-Mir-22-P2  Pve-Mir-22-P2  Rph-Mir-22-P2  Sko-Mir-22-P2  Snu-Mir-22-P2  Spu-Mir-22-P2  Tca-Mir-22-P2-v1  Tur-Mir-22-P2  War-Mir-22-P2  Xbo-Mir-22-P2d  Xbo-Mir-22-P2e 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(CGI_GCA_000297895.1)		 scaffold726: 81942-82005 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-22-P2)		 Mir-22-P2 scaffold726: 81942-82005 [-] Ensembl
Mir-22-P1 scaffold726: 82804-82861 [-] Ensembl
Seed AGCUGCC
Precursor
(pre-Mir +30nt flank)		 
GCUUUUUCUCAAUGACAAGCUUGGAAUGGUAGUUUUUCCUUUGGCCAGCUAUCUCGUGCAAUUCUGAGCUGAGAGCUGCCAAAUGAAGGGCUGUUGUUUCUGCUCACCAAGCAAACUUCAUCAA
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Structure
        10           20        30        40        50        60   
GCUUUUUCUCAAUGACA---|  UU     GG         C      C   UA    GUGCAAU 
                    AGC  GGAAU  UAGUUUUUC UUUGGC AGC  UCUC       \
                    UCG  CUUUG  GUCGGGAAG AAACCG UCG  AGAG       U
AACUACUUCAAACGAACCAC^  U-     UU         U      -   --    UCGAGUC 
  120       110        100        90        80           70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
A- D- D- F- L- Ea Eg Fe Gi Ha He Ju La Ma Ma Ma Pe Re Sp Um
Star sequence

Mgi-Mir-22-P2_5p*
mirBase accessionNone
Sequence 
0- AGUUUUUCCUUUGGCCAGCUAUCUC -25
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Mature sequence

Mgi-Mir-22-P2_3p
mirBase accessionNone
Sequence 
42- GAGCUGCCAAAUGAAGGGCUGU -64
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