Mir-22-P2

MirGeneDB ID

Dlo-Mir-22-P2

Family name

MIR-22 (all species)

Species

Braconid wasp (Diachasmimorpha longicaudata)

MiRBase ID

Paralogues

Orthologues

Aae-Mir-22-P2 Aga-Mir-22-P2 Agr-Mir-22-P2 Asu-Mir-22-P2 Bfl-Mir-22-P2a Bfl-Mir-22-P2b Bfl-Mir-22-P2c Bge-Mir-22-P2 Bla-Mir-22-P2a Bla-Mir-22-P2b Bla-Mir-22-P2c Cbr-Mir-22-P2-v1 Cel-Mir-22-P2 Csc-Mir-22-P2 Cte-Mir-22-P2 Dan-Mir-22-P2 Dma-Mir-22-P2 Dme-Mir-22-P2 Dmo-Mir-22-P2 Dpu-Mir-22-P2 Dsi-Mir-22-P2 Dya-Mir-22-P2 Eba-Mir-22-P2 Esc-Mir-22-P2 Gpa-Mir-22-P2 Hme-Mir-22-P2 Hru-Mir-22-P2 Isc-Mir-22-P2 Lan-Mir-22-P2 Lgi-Mir-22-P2 Lhy-Mir-22-P2 Llo-Mir-22-P2 Lpo-Mir-22-P2f Lpo-Mir-22-P2g Lpo-Mir-22-P2h Lpo-Mir-22-P2i Mgi-Mir-22-P2 Mom-Mir-22-P2 Npo-Mir-22-P2 Ofu-Mir-22-P2j Ofu-Mir-22-P2k Ovu-Mir-22-P2 Pau-Mir-22-P2 Pca-Mir-22-P2 Pcr-Mir-22-P2l Pcr-Mir-22-P2m Pdu-Mir-22-P2 Pfl-Mir-22-P2 Pmi-Mir-22-P2 Pve-Mir-22-P2 Rph-Mir-22-P2 Sko-Mir-22-P2 Snu-Mir-22-P2 Spu-Mir-22-P2 Tca-Mir-22-P2-v1 Tur-Mir-22-P2 War-Mir-22-P2 Xbo-Mir-22-P2d Xbo-Mir-22-P2e

Node of Origin (locus)

Bilateria

Node of Origin (family)

Bilateria

Genome context
(GCF_034640455.1_iyDiaLong2_genomic)

NC_087230.1: 3340769-3340831 [-] Ensembl

Seed

AGCUGCC

Precursor
(pre-Mir +30nt flank)

UGAUAGGGGAAAAAACUGCCGAUUACGUUGCAGCUCAUCAUGGGGCACUUUGCUGAUUAAUUUGAAACGCUAGCUGCCUUUUGAAGGGCAACAAUGUGGUCGGUUUCUAGAACGAGGCCCCUA

Get precursor sequence

Structure

        10          20        30        40         50        60 
UGAUAGGGGAAAAAACU--             CA    A   UG     -| UU  UGAUUAA 
                   GCCGAUUACGUUG  GCUC UCA  GGGCA CU  GC       \
                   UGGCUGGUGUAAC  CGGG AGU  UCCGU GA  CG       U
AUCCCCGGAGCAAGAUCUU             AA    A   UU     C^ U-  CAAAGUU 
 120       110       100        90        80         70

Deep sequencing

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3' NTU

Motifs

UG at 5p(-14)

Tissue expression

Sr	Sr

Star sequence

Dlo-Mir-22-P2_5p*

mirBase accession

None

Sequence

0- CAGCUCAUCAUGGGGCACUUUGC -23

Get sequence

Mature sequence

Dlo-Mir-22-P2_3p

mirBase accession

None

Sequence

40- UAGCUGCCUUUUGAAGGGCAACA -63

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