MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-22-P2

Family name MIR-22 (all species)
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues
Orthologues Aae-Mir-22-P2  Aga-Mir-22-P2  Agr-Mir-22-P2  Asu-Mir-22-P2  Bfl-Mir-22-P2a  Bfl-Mir-22-P2b  Bfl-Mir-22-P2c  Bge-Mir-22-P2  Bla-Mir-22-P2a  Bla-Mir-22-P2b  Bla-Mir-22-P2c  Cbr-Mir-22-P2-v1  Cel-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dlo-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Eba-Mir-22-P2  Esc-Mir-22-P2  Hme-Mir-22-P2  Hru-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lhy-Mir-22-P2  Llo-Mir-22-P2  Lpo-Mir-22-P2f  Lpo-Mir-22-P2g  Lpo-Mir-22-P2h  Lpo-Mir-22-P2i  Mgi-Mir-22-P2  Mom-Mir-22-P2  Npo-Mir-22-P2  Ofu-Mir-22-P2j  Ofu-Mir-22-P2k  Ovu-Mir-22-P2  Pau-Mir-22-P2  Pca-Mir-22-P2  Pcr-Mir-22-P2l  Pcr-Mir-22-P2m  Pdu-Mir-22-P2  Pfl-Mir-22-P2  Pmi-Mir-22-P2  Pve-Mir-22-P2  Rph-Mir-22-P2  Sko-Mir-22-P2  Snu-Mir-22-P2  Spu-Mir-22-P2  Tca-Mir-22-P2-v1  Tur-Mir-22-P2  War-Mir-22-P2  Xbo-Mir-22-P2d  Xbo-Mir-22-P2e 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GpalI1)		 Scaffold338: 26389-26451 [+] Ensembl
Seed AGCUGCC
Precursor
(pre-Mir +30nt flank)		 
UGUGGAAAAUUGAAAGAAAAAGAUUACAAGACAGUCCUUCAAUUGGCAAUUUAGCUGUUUUUUUAUUGUUAGCUGCCUUCUGAAGGGCUUCCUUGUAAUUUCCAAGCAACUCUAAAUAACAAG
Get precursor sequence
Structure
        10        20          30        40        50        60 
UGUGGAAAAUUGAAAGAAAA--|         AC         AUU    AU     UGUUU 
                      AGAUUACAAG  AGUCCUUCA   GGCA  UUAGC     U
                      UUUAAUGUUC  UCGGGAAGU   CCGU  GAUUG     U
GAACAAUAAAUCUCAACGAACC^         CU         CUU    C-     UUAUU 
 120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
- +
To To To To To To To To To To To To To To To To To To To To To
Star sequence

Gpa-Mir-22-P2_5p*
mirBase accessionNone
Sequence 
0- ACAGUCCUUCAAUUGGCAAUUUAGC -25
Get sequence
Mature sequence

Gpa-Mir-22-P2_3p
mirBase accessionNone
Sequence 
39- UAGCUGCCUUCUGAAGGGCUUCCU -63
Get sequence