MirGeneDB 3.0
75 microRNA genes with seed GAGUAUU
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Aae-Mir-12 aae-mir-12 MIR-12 GAGUAUU MIMAT0014253 MIMAT0014254 supercont1.68 2720399 2720490 - Protostomia Protostomia No 1
Aga-Mir-12 aga-mir-12 MIR-12 GAGUAUU MIMAT0005527 None NC_064601.1 37379265 37379375 - Protostomia Protostomia No 1
Agr-Mir-12 None MIR-12 GAGUAUU None None JABBOT010000010.1 20311300 20311359 - Protostomia Protostomia Unknown 1
Ava-Mir-12 None MIR-12 GAGUAUU None None CP075497.1 11031363 11031424 - Protostomia Protostomia No
Bge-Mir-12 None MIR-12 GAGUAUU None None KZ614411.1 688819 688880 - Protostomia Protostomia No 1 1
Bko-Mir-12 None MIR-12 GAGUAUU None None PJRA01000114.1 1223532 1223592 - Protostomia Protostomia Unknown
Bpl-Mir-12 None MIR-12 GAGUAUU None None QEOQ01000141.1 556006 556066 + Protostomia Protostomia Unknown
Csc-Mir-12 None MIR-12 GAGUAUU None None NW_019384639.1 170008 170065 + Protostomia Protostomia No 1 1
Cte-Mir-12 cte-mir-12 MIR-12 GAGUAUU MIMAT0009512 None CAPTEscaffold_192 33844 33902 - Protostomia Protostomia No 1 1
Dan-Mir-12 dan-mir-12 MIR-12 GAGUAUU MIMAT0008418 None scaffold_12929 2898590 2898653 - Protostomia Protostomia No 1
Dgr-Mir-12 None MIR-12 GAGUAUU None None CAJFCJ010000014.1 1074976 1075034 - Protostomia Protostomia Unknown 1
Dlo-Mir-12 None MIR-12 GAGUAUU None None NC_087231.1 9574299 9574360 + Protostomia Protostomia No 1
Dma-Mir-12 None MIR-12 GAGUAUU None None NC_046176.1 6126792 6126852 + Protostomia Protostomia No 1 1
Dme-Mir-12 dme-mir-12 MIR-12 GAGUAUU MIMAT0000117 MIMAT0020794 X 15509479 15509542 + Protostomia Protostomia No 1
Dmo-Mir-12 dmo-mir-12 MIR-12 GAGUAUU MIMAT0008630 None scaffold_6359 3259793 3259856 + Protostomia Protostomia No 1
Dpu-Mir-12 dpu-mir-12 MIR-12 GAGUAUU MIMAT0012638 None DAPPUscaffold_1 1847845 1847905 - Protostomia Protostomia No 1 1
Dsi-Mir-12 dsi-mir-12 MIR-12 GAGUAUU MIMAT0008852 None X 14557177 14557240 + Protostomia Protostomia No 1
Eba-Mir-12 None MIR-12 GAGUAUU None None WURV02156550.1 15224 15281 + Protostomia Protostomia No 1 1
Egr-Mir-12 egr-mir-10228 MIR-12 GAGUAUU MIMAT0041185 MIMAT0041186 APAU02000061.1 48094 48163 - Protostomia Protostomia Unknown 1 1
Esc-Mir-12 None MIR-12 GAGUAUU None None JANFOI010000056.1 178869 178928 + Protostomia Protostomia Unknown 1
Gpa-Mir-12 None MIR-12 GAGUAUU None None Scaffold19 1474288 1474372 + Protostomia Protostomia No 1 1
Gsp-Mir-12 None MIR-12 GAGUAUU None None OX940787.1 22142794 22142856 - Protostomia Protostomia Unknown 1
Hme-Mir-12 hme-mir-12 MIR-12 GAGUAUU None MIMAT0024936 HE669534 42572 42850 + Protostomia Protostomia No 1
Hru-Mir-12 None MIR-12 GAGUAUU None None JALGQA010000003.1 15756156 15756212 + Protostomia Protostomia Unknown 1
Isc-Mir-12 isc-mir-12 MIR-12 GAGUAUU MIMAT0012684 None NW_024609836.1 71440117 71440176 + Protostomia Protostomia No 1
Lgi-Mir-12 lgi-mir-12 MIR-12 GAGUAUU MIMAT0009564 None LOTGIsca_22 809271 809328 + Protostomia Protostomia Unknown 1 1
Lhy-Mir-12 None MIR-12 GAGUAUU None None scaffold332078_37.1 1411 1467 + Protostomia Protostomia Unknown 1
Llo-Mir-12 None MIR-12 GAGUAUU None None OU342994.1 2295834 2295889 - Protostomia Protostomia No 1
Mgi-Mir-12 None MIR-12 GAGUAUU None None scaffold1785 68054 68110 - Protostomia Protostomia No 1
Npo-Mir-12 None MIR-12 GAGUAUU None None JACATO010001670.1 34868 34925 - Protostomia Protostomia Unknown 1 1
Ofu-Mir-12 None MIR-12 GAGUAUU None None CAIIXF020000008.1 38332955 38333011 + Protostomia Protostomia Unknown 1 1
Ovu-Mir-12 None MIR-12 GAGUAUU None None RXHP01022029.1 178502 178560 - Protostomia Protostomia No
Pau-Mir-12 None MIR-12 GAGUAUU None None NMRA01000005.1 1646308 1646364 - Protostomia Protostomia Unknown 1 1
Pcr-Mir-12 None MIR-12 GAGUAUU None None CAJQUW010001040.1 128016 128074 - Protostomia Protostomia No 1
Pdu-Mir-12 None MIR-12 GAGUAUU None None JAPTHN010000007.1 46912751 46912810 - Protostomia Protostomia No 1 1
Pve-Mir-12 None MIR-12 GAGUAUU None None Pve_Chr5 380934277 380934333 - Protostomia Protostomia Unknown 1 1
Rph-Mir-12 None MIR-12 GAGUAUU None None CM018538.1 42667417 42667474 + Protostomia Protostomia No 1
Snu-Mir-12 None MIR-12 GAGUAUU None None CM049308.1 11128211 11128272 - Protostomia Protostomia Unknown 1 1
Tca-Mir-12 tca-mir-12 MIR-12 GAGUAUU MIMAT0008358 MIMAT0019102 LG3 21686059 21686118 - Protostomia Protostomia No 1
War-Mir-12 None MIR-12 GAGUAUU None None WNLI01070436.1 9566 9623 - Protostomia Protostomia No 1 1
Efe-Mir-12-P1 None MIR-12 GAGUAUU None None Efet.01.276528 2647 2707 - E. fetida Protostomia No
Efe-Mir-12-P2 None MIR-12 GAGUAUU None None scaffold9233-size18363 16287 16347 + E. fetida Protostomia No 1
Lan-Mir-12-P3 None MIR-12 GAGUAUU None None LFEI01001594 16199 16258 + L. anatina Protostomia Unknown 1
Lan-Mir-12-P4 None MIR-12 GAGUAUU None None LFEI01000141 488714 488773 + L. anatina Protostomia Unknown 1
Lpo-Mir-12-P5 None MIR-12 GAGUAUU None None NW_013668423.1 42459 42516 - L. polyphemus Protostomia No 1
Lpo-Mir-12-P6 None MIR-12 GAGUAUU None None NW_013672844.1 18331 18392 - L. polyphemus Protostomia No 1
Lpo-Mir-12-P7 None MIR-12 GAGUAUU None None NW_013668005.1 36226 36287 + L. polyphemus Protostomia Unknown 1
Lpo-Mir-12-P8 None MIR-12 GAGUAUU None None NW_013742680.1 788 843 + L. polyphemus Protostomia Unknown 1
Sme-Mir-12-P9 sme-mir-12 MIR-12 GAGUAUU MIMAT0003975 MIMAT0012100 NNSW01000015_dd_Smes_g4_15 155743 155813 - S. mediterranea Protostomia No 1
Sme-Mir-12-P10 sme-mir-2157 MIR-12 GAGUAUU MIMAT0011250 MIMAT0012148 NNSW01000085_dd_Smes_g4_85 414521 414575 + S. mediterranea Protostomia Unknown
Sme-Mir-12-P11 sme-mir-2158 MIR-12 GAGUAUU MIMAT0011251 MIMAT0012149 NNSW01000007_dd_Smes_g4_7 5199085 5199146 + S. mediterranea Protostomia Yes 1
Pca-Mir-12-P12 None MIR-12 GAGUAUU None None KQ715014.1 183644 183702 - P. caudatus Protostomia Unknown 1
Pca-Mir-12-P13 None MIR-12 GAGUAUU None None KQ715627.1 148169 148228 - P. caudatus Protostomia No 1 1
Tur-Mir-12-P14 tur-mir-12a MIR-12 GAGUAUU MIMAT0023102 MIMAT0023103 HE587328.1 1008240 1008300 + T. urticae Protostomia No 1
Tur-Mir-12-P15 tur-mir-12b MIR-12 GAGUAUU MIMAT0023044 MIMAT0023045 HE587311.1 1901159 1901218 - T. urticae Protostomia No
Bta-Mir-154-P28 bta-mir-496 MIR-154 GAGUAUU None MIMAT0009336 NC_037348.1 65949538 65949591 + Eutheria Eutheria No 1
Cfa-Mir-154-P28 cfa-mir-496 MIR-154 GAGUAUU None MIMAT0009906 chr8 69289429 69289482 + Eutheria Eutheria No 1
Cja-Mir-154-P28 None MIR-154 GAGUAUU None None CM021924.1 131875373 131875426 + Eutheria Eutheria Unknown 1
Eca-Mir-154-P28 eca-mir-496 MIR-154 GAGUAUU None MIMAT0013166 CM009171.1 43369646 43369699 + Eutheria Eutheria No 1
Laf-Mir-154-P28 None MIR-154 GAGUAUU None None GL010036.1 75521503 75521556 - Eutheria Eutheria Unknown 1
Mmr-Mir-154-P28 None MIR-154 GAGUAUU None None CM007663.1 12755051 12755104 + Eutheria Eutheria Unknown 1
Pab-Mir-154-P28 None MIR-154 GAGUAUU None None CM054694.2 105492622 105492675 + Eutheria Eutheria No 1
Cpo-Mir-154-P28 V cpo-mir-496 MIR-154 GAGUAUU MIMAT0047293 MIMAT0047294 scaffold_111 1113040 1113093 + Eutheria Eutheria 2 No 1
Dno-Mir-154-P28 V dno-mir-496 MIR-154 GAGUAUU MIMAT0047932 MIMAT0047933 JH578221 161287 161340 + Eutheria Eutheria 2 No 1
Ete-Mir-154-P28 V None MIR-154 GAGUAUU None None JH980297 82282453 82282506 - Eutheria Eutheria 2 No 1
Hsa-Mir-154-P28 V hsa-mir-496 MIR-154 GAGUAUU None MIMAT0002818 chr14 101060596 101060649 + Eutheria Eutheria 2 No 1
Mml-Mir-154-P28 V mml-mir-496 MIR-154 GAGUAUU None MIMAT0006358 CM014342.1 163280787 163280840 + Eutheria Eutheria 2 No 1
Mmu-Mir-154-P28 V mmu-mir-496a MIR-154 GAGUAUU MIMAT0017244 MIMAT0003738 chr12 109739133 109739186 + Eutheria Eutheria 2 No 1
Ocu-Mir-154-P28 V ocu-mir-496 MIR-154 GAGUAUU MIMAT0048485 MIMAT0048486 chrUn0352 149012 149065 + Eutheria Eutheria 2 No 1
Rno-Mir-154-P28 V rno-mir-496 MIR-154 GAGUAUU MIMAT0017372 MIMAT0012860 chr6 133889297 133889350 + Eutheria Eutheria 2 No 1
Dan-Mir-960 None MIR-960 GAGUAUU None None scaffold_12916 11084881 11084940 + Drosophila Drosophila No
Dme-Mir-960 dme-mir-960 MIR-960 GAGUAUU MIMAT0005474 MIMAT0020855 2L 5641081 5641140 + Drosophila Drosophila No
Dsi-Mir-960 dsi-mir-960 MIR-960 GAGUAUU MIMAT0012495 None 2L 5445734 5445793 + Drosophila Drosophila No
Dya-Mir-960 None MIR-960 GAGUAUU None None 2L 13552167 13552226 - Drosophila Drosophila No
Sne-Novel-4 None SNE-NOVEL-4 GAGUAUU None None k141_2644 39258 39350 - S. nebaliae S. nebaliae No 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all