MirGeneDB 3.0
MirGeneDB ID

Bge-Mir-12

Family name MIR-12 (all species)
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues Aae-Mir-12  Aga-Mir-12  Agr-Mir-12  Ava-Mir-12  Bko-Mir-12  Bpl-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dgr-Mir-12  Dlo-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Eba-Mir-12  Efe-Mir-12-P1  Efe-Mir-12-P2  Egr-Mir-12  Esc-Mir-12  Gpa-Mir-12  Gsp-Mir-12  Hme-Mir-12  Hru-Mir-12  Isc-Mir-12  Lan-Mir-12-P3  Lan-Mir-12-P4  Lgi-Mir-12  Lhy-Mir-12  Llo-Mir-12  Lpo-Mir-12-P5  Lpo-Mir-12-P6  Lpo-Mir-12-P7  Lpo-Mir-12-P8  Mgi-Mir-12  Mom-Mir-12  Npo-Mir-12  Ofu-Mir-12  Ovu-Mir-12  Pau-Mir-12  Pca-Mir-12-P12  Pca-Mir-12-P13  Pcr-Mir-12  Pdu-Mir-12  Pve-Mir-12  Rph-Mir-12  Sme-Mir-12-P9  Sme-Mir-12-P10  Sme-Mir-12-P11  Snu-Mir-12  Tca-Mir-12  Tur-Mir-12-P14  Tur-Mir-12-P15  War-Mir-12 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Bger_2.0)		 KZ614411.1: 688819-688880 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-12)		 Mir-12 KZ614411.1: 688819-688880 [-] Ensembl
Mir-216-P2 KZ614411.1: 695302-695361 [-] Ensembl
Mir-216-P1 KZ614411.1: 696520-696578 [-] Ensembl
Seed GAGUAUU
Precursor
(pre-Mir +30nt flank)		 
UCUUGACGCUUGUUGAUGGGCGUCGAGCCGUGAGUAUUACAUCAGGUACUGGUGAGACAUUAGAACAACCCAGUACUUGUGUUAUACUUUCGAUUCGGCUGCUCUUGCUCAUCCACCUAGAU
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Structure
        10         20         30        40        50        60 
UCUUGACGCUUGUUGAU-    -|    GC  U      U   U          UGAGACAU 
                  GGGC GUCGA  CG GAGUAU ACA CAGGUACUGG        \
                  CUCG CGGCU  GC UUCAUA UGU GUUCAUGACC        U
UAGAUCCACCUACUCGUU    U^    UA  U      U   -          CAACAAGA 
120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ad Ad Co Co Di Di Eg Eg Em Em Em Em Em Em Em Em Em Em Ny Ny Ny Ny Ny Ny Ny Ny Ov
Mature sequence

Bge-Mir-12_5p
mirBase accessionNone
Sequence 
0- UGAGUAUUACAUCAGGUACUGGU -23
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Star sequence

Bge-Mir-12_3p*
mirBase accessionNone
Sequence 
40- CAGUACUUGUGUUAUACUUUCG -62
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