MirGeneDB

94 microRNA genes with node of origin Osteichthyes
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Aca-Mir-187 aca-mir-187 MIR-187 CGUGUCU MIMAT0021815 MIMAT0021816 6 57644276 57644331 - Osteichthyes Osteichthyes No 1
Ami-Mir-187 ami-mir-187 MIR-187 CGUGUCU MIMAT0038200 MIMAT0038201 JH737999 208630 208686 + Osteichthyes Osteichthyes Yes 1
Bta-Mir-187 bta-mir-187 MIR-187 CGUGUCU None MIMAT0009248 chr24 21530935 21530991 + Osteichthyes Osteichthyes No 1
Cfa-Mir-187 cfa-mir-187 MIR-187 CGUGUCU None MIMAT0009843 chr7 54261948 54262005 + Osteichthyes Osteichthyes Yes
Cli-Mir-187 cli-mir-187 MIR-187 CGUGUCU MIMAT0038562 MIMAT0038563 scaffold231 68272 68328 + Osteichthyes Osteichthyes Yes 1
Cpi-Mir-187 cpi-mir-187 MIR-187 CGUGUCU MIMAT0037802 MIMAT0037803 JH584679 7346505 7346561 + Osteichthyes Osteichthyes Yes 1
Cpo-Mir-187 cpo-mir-187 MIR-187 CGUGUCU MIMAT0047058 MIMAT0047059 scaffold_14 28433766 28433822 + Osteichthyes Osteichthyes No 1
Dno-Mir-187 dno-mir-187 MIR-187 CGUGUCU MIMAT0047709 MIMAT0047710 JH569198 1597464 1597520 - Osteichthyes Osteichthyes No 1
Dre-Mir-187 dre-mir-187 MIR-187 CGUGUCU None MIMAT0001274 chr19 34135627 34135688 + Osteichthyes Osteichthyes Yes 1 1
Ete-Mir-187 None MIR-187 CGUGUCU None None JH980306 26683463 26683520 - Osteichthyes Osteichthyes No 1
Gga-Mir-187 gga-mir-187 MIR-187 CGUGUCU MIMAT0026507 MIMAT0001124 2 83889632 83889688 + Osteichthyes Osteichthyes Yes 1
Hsa-Mir-187 hsa-mir-187 MIR-187 CGUGUCU MIMAT0004561 MIMAT0000262 chr18 35904835 35904891 - Osteichthyes Osteichthyes Yes 1
Mdo-Mir-187 mdo-mir-187 MIR-187 CGUGUCU MIMAT0026674 MIMAT0004120 3 87606214 87606272 + Osteichthyes Osteichthyes Yes
Mml-Mir-187 mml-mir-187 MIR-187 CGUGUCU MIMAT0026833 MIMAT0006221 chr18 24590843 24590902 - Osteichthyes Osteichthyes No
Mmu-Mir-187 mmu-mir-187 MIR-187 CGUGUCU MIMAT0016997 MIMAT0000216 chr18 24429111 24429166 - Osteichthyes Osteichthyes Yes 1
Oan-Mir-187 oan-mir-187 MIR-187 CGUGUCU MIMAT0007266 MIMAT0007267 NC_041751.1 4330272 4330330 - Osteichthyes Osteichthyes No
Ocu-Mir-187 ocu-mir-187 MIR-187 CGUGUCU MIMAT0048295 MIMAT0048296 chr9 77158808 77158864 - Osteichthyes Osteichthyes No 1
Rno-Mir-187 rno-mir-187 MIR-187 CGUGUCU MIMAT0017144 MIMAT0000864 chr18 16390525 16390580 - Osteichthyes Osteichthyes Yes 1
Sha-Mir-187 None MIR-187 CGUGUCU None None GL841201.1 2343392 2343450 + Osteichthyes Osteichthyes Yes
Tgu-Mir-187 tgu-mir-187 MIR-187 CGUGUCU MIMAT0027004 MIMAT0014567 2_random 838735 838791 + Osteichthyes Osteichthyes Yes 1
Xtr-Mir-187 xtr-mir-187 MIR-187 CGUGUCU None MIMAT0003614 KB021656 75418044 75418102 - Osteichthyes Osteichthyes No
Aca-Mir-458 aca-mir-458 MIR-458 UAGCUCU None MIMAT0021969 2 121791169 121791226 - Osteichthyes Osteichthyes No 1
Ami-Mir-458 ami-mir-458 MIR-458 UAGCUCU None MIMAT0038290 JH739175 234272 234329 + Osteichthyes Osteichthyes No 1
Cli-Mir-458 cli-mir-458 MIR-458 UAGCUCU MIMAT0038649 MIMAT0038650 scaffold636 126032 126089 + Osteichthyes Osteichthyes No 1
Cpi-Mir-458 cpi-mir-458 MIR-458 UAGCUCU MIMAT0037890 MIMAT0037891 JH584689 4003125 4003182 - Osteichthyes Osteichthyes No 1
Dre-Mir-458 dre-mir-458 MIR-458 UAGCUCU MIMAT0032005 MIMAT0001885 chr14 25159138 25159195 - Osteichthyes Osteichthyes No 1
Gga-Mir-458 gga-mir-458a MIR-458 UAGCUCU MIMAT0007745 MIMAT0007746 13 8233340 8233397 - Osteichthyes Osteichthyes No 1
Oan-Mir-458 oan-mir-458 MIR-458 UAGCUCU MIMAT0007009 MIMAT0007010 NC_041749.1 17802192 17802249 + Osteichthyes Osteichthyes No 1
Tgu-Mir-458 tgu-mir-458 MIR-458 UAGCUCU MIMAT0026962 MIMAT0014466 13 1397271 1397328 - Osteichthyes Osteichthyes No
Xtr-Mir-458 None MIR-458 UAGCUCU None None KB021651 72902569 72902626 + Osteichthyes Osteichthyes No 1
Aca-Mir-460-P1 aca-mir-460a MIR-460 CUGCAUU MIMAT0021970 MIMAT0021971 GL343687.1 195346 195404 - Osteichthyes Osteichthyes No 1
Ami-Mir-460-P1 ami-mir-460a MIR-460 CUGCAUU MIMAT0038292 None JH737007 80496 80554 - Osteichthyes Osteichthyes Unknown 1
Cli-Mir-460-P1 None MIR-460 CUGCAUU None None scaffold517 1526048 1526106 + Osteichthyes Osteichthyes No 1
Cpi-Mir-460-P1 cpi-mir-460a MIR-460 CUGCAUU MIMAT0037894 MIMAT0037895 JH584507 211097 211155 - Osteichthyes Osteichthyes No 1
Dre-Mir-460-P1 dre-mir-460 MIR-460 ACAGCGC MIMAT0001887 MIMAT0001888 chr2 2301366 2301424 - Osteichthyes Osteichthyes Yes 1 1
Gga-Mir-460-P1 gga-mir-460a MIR-460 CUGCAUU MIMAT0003778 MIMAT0026646 2 3692594 3692652 + Osteichthyes Osteichthyes No 1 1
Mdo-Mir-460-P1 mdo-mir-460 MIR-460 CUGCAUU MIMAT0012758 MIMAT0026945 6 197334861 197334917 - Osteichthyes Osteichthyes Yes 1
Oan-Mir-460-P1 oan-mir-460 MIR-460 CUGCAUU MIMAT0006915 MIMAT0006916 NC_041740.1 1810852 1810908 + Osteichthyes Osteichthyes Yes 1
Sha-Mir-460-P1 None MIR-460 CUGCAUU None None GL841580.1 38710 38767 - Osteichthyes Osteichthyes No 1
Tgu-Mir-460-P1 tgu-mir-460a MIR-460 CUGCAUU MIMAT0014614 MIMAT0014658 2 1092253 1092310 - Osteichthyes Osteichthyes No 1 1
Xtr-Mir-460-P1 None MIR-460 CUGCAUU None None KB021656 134794299 134794357 + Osteichthyes Osteichthyes No 1
Aca-Mir-460-P2 aca-mir-460b MIR-460 CCUCAUU MIMAT0021972 MIMAT0021973 GL343403.1 879933 879991 - Osteichthyes Osteichthyes No 1
Ami-Mir-460-P2 ami-mir-460b MIR-460 CCUCAUU MIMAT0038293 MIMAT0038294 JH738437 213732 213790 + Osteichthyes Osteichthyes No 1
Cli-Mir-460-P2 None MIR-460 CCUCAUU None None scaffold72 1902296 1902352 + Osteichthyes Osteichthyes No 1
Cpi-Mir-460-P2 cpi-mir-460b MIR-460 CCUCAUU MIMAT0037896 None JH584720 6148377 6148435 - Osteichthyes Osteichthyes No 1
Dre-Mir-460-P2 dre-mir-730 MIR-460 CCUCAUU MIMAT0003760 None chr7 23362175 23362234 + Osteichthyes Osteichthyes Yes 1
Gga-Mir-460-P2 gga-mir-460b MIR-460 CCUCAUU MIMAT0007326 MIMAT0007327 4 2714102 2714158 + Osteichthyes Osteichthyes No 1
Tgu-Mir-460-P2 tgu-mir-460b MIR-460 CCUCAUU MIMAT0014476 MIMAT0014624 4A 20408554 20408610 + Osteichthyes Osteichthyes No 1
Xtr-Mir-460-P2 None MIR-460 CCUCAUU None None KB021658 43219726 43219784 + Osteichthyes Osteichthyes No 1
Cfa-Mir-489 cfa-mir-489 MIR-489 UGACAUC None MIMAT0009860 chr14 18980191 18980250 - Osteichthyes Osteichthyes No 1
Dno-Mir-489 dno-mir-489 MIR-489 UGACAUC MIMAT0047920 MIMAT0047921 JH574710 687595 687653 + Osteichthyes Osteichthyes No 1
Mmu-Mir-489 mmu-mir-489 MIR-489 AUGACAC MIMAT0022704 MIMAT0003112 chr6 3721922 3721981 - Osteichthyes Osteichthyes No 1
Ocu-Mir-489 ocu-mir-489 MIR-489 UGACAUC MIMAT0048477 MIMAT0048478 chr10 35345574 35345633 + Osteichthyes Osteichthyes No 1
Rno-Mir-489 rno-mir-489 MIR-489 UGACAUC MIMAT0017196 MIMAT0003113 chr4 28659547 28659606 - Osteichthyes Osteichthyes No 1
Aca-Mir-489-v1 aca-mir-489 MIR-489 UGACAUC MIMAT0021974 MIMAT0021975 6 21750917 21750976 - Osteichthyes Osteichthyes No 1
Ami-Mir-489-v1 ami-mir-489 MIR-489 UGACAUC MIMAT0038295 MIMAT0038296 JH734578 151561 151620 - Osteichthyes Osteichthyes No 1
Bta-Mir-489-v1 bta-mir-489 MIR-489 UGACAUC None MIMAT0009942 chr4 10654205 10654264 - Osteichthyes Osteichthyes No 1
Cli-Mir-489-v1 cli-mir-489 MIR-489 UGACAUC MIMAT0038656 MIMAT0038657 scaffold169 1811717 1811776 + Osteichthyes Osteichthyes No 1
Cpi-Mir-489-v1 cpi-mir-489 MIR-489 UGACAUC MIMAT0037897 MIMAT0037898 JH584862 1032484 1032543 - Osteichthyes Osteichthyes No 1
Dre-Mir-489-v1 dre-mir-489 MIR-489 UGACAUC None MIMAT0002940 chr19 40781190 40781248 - Osteichthyes Osteichthyes No 1
Gga-Mir-489-v1 gga-mir-489 MIR-489 UGACAUC MIMAT0026632 MIMAT0003365 2 23147311 23147370 - Osteichthyes Osteichthyes No 1
Hsa-Mir-489-v1 hsa-mir-489 MIR-489 UGACAUC MIMAT0026605 MIMAT0002805 chr7 93483947 93484006 - Osteichthyes Osteichthyes No 1
Mml-Mir-489-v1 mml-mir-489 MIR-489 UGACAUC MIMAT0026883 MIMAT0006349 chr3 118803471 118803530 - Osteichthyes Osteichthyes No 1
Tgu-Mir-489-v1 tgu-mir-489 MIR-489 UGACAUC MIMAT0027024 MIMAT0014618 2 25436298 25436357 - Osteichthyes Osteichthyes No 1
Xtr-Mir-489-v1 xtr-mir-489 MIR-489 UGACAUC None MIMAT0003642 KB021656 113072304 113072363 + Osteichthyes Osteichthyes No 1
Aca-Mir-489-v2 aca-mir-489 MIR-489 GACAUCA MIMAT0021974 MIMAT0021975 6 21750916 21750977 - Osteichthyes Osteichthyes No 1
Ami-Mir-489-v2 ami-mir-489 MIR-489 GACAUCA MIMAT0038295 MIMAT0038296 JH734578 151560 151621 - Osteichthyes Osteichthyes No 1
Bta-Mir-489-v2 bta-mir-489 MIR-489 GACAUCA None MIMAT0009942 chr4 10654204 10654265 - Osteichthyes Osteichthyes No 1
Cli-Mir-489-v2 cli-mir-489 MIR-489 GACAUCA MIMAT0038656 MIMAT0038657 scaffold169 1811716 1811777 + Osteichthyes Osteichthyes No 1
Cpi-Mir-489-v2 cpi-mir-489 MIR-489 GACAUCA MIMAT0037897 MIMAT0037898 JH584862 1032483 1032544 - Osteichthyes Osteichthyes No 1
Dre-Mir-489-v2 dre-mir-489 MIR-489 GACAUCA None MIMAT0002940 chr19 40781189 40781249 - Osteichthyes Osteichthyes No 1
Gga-Mir-489-v2 gga-mir-489 MIR-489 GACAUCA MIMAT0026632 MIMAT0003365 2 23147310 23147371 - Osteichthyes Osteichthyes No 1
Hsa-Mir-489-v2 hsa-mir-489 MIR-489 GACAUCA MIMAT0026605 MIMAT0002805 chr7 93483946 93484007 - Osteichthyes Osteichthyes No 1 1
Mml-Mir-489-v2 mml-mir-489 MIR-489 GACAUCA MIMAT0026883 MIMAT0006349 chr3 118803470 118803531 - Osteichthyes Osteichthyes No 1 1
Tgu-Mir-489-v2 tgu-mir-489 MIR-489 GACAUCA MIMAT0027024 MIMAT0014618 2 25436297 25436358 - Osteichthyes Osteichthyes No 1
Xtr-Mir-489-v2 xtr-mir-489 MIR-489 GACAUCA None MIMAT0003642 KB021656 113072303 113072364 + Osteichthyes Osteichthyes No 1 1
Bta-Mir-489-v3 bta-mir-489 MIR-489 GUGACAU None MIMAT0009942 chr4 10654205 10654264 - Osteichthyes Osteichthyes No 1
Aca-Mir-726 aca-mir-726 MIR-726 UCACUAC None MIMAT0021986 2 88642252 88642312 - Osteichthyes Osteichthyes No 1
Cpi-Mir-726 cpi-mir-726 MIR-726 UCACUAC None MIMAT0037907 JH584439 94889 94949 - Osteichthyes Osteichthyes No 1 1
Dre-Mir-726 dre-mir-726 MIR-726 UCACUAC None MIMAT0003754 chr11 25476111 25476171 - Osteichthyes Osteichthyes No 1
Xtr-Mir-726 None MIR-726 UCACUAC None None KB021658 12977883 12977947 + Osteichthyes Osteichthyes Yes 1
Cpi-Mir-727 cpi-mir-727 MIR-727 UUGAGGC None MIMAT0037998 JH584458 2755678 2755737 - Osteichthyes Osteichthyes No 1
Aca-Mir-727-v1 aca-mir-727 MIR-727 CAGUCUU MIMAT0021987 MIMAT0021988 3 28511685 28511749 + Osteichthyes Osteichthyes No
Dre-Mir-727-v1 dre-mir-727 MIR-727 CAGUCUU MIMAT0003755 MIMAT0003756 chr24 26185423 26185488 + Osteichthyes Osteichthyes No
Aca-Mir-727-v2 aca-mir-727 MIR-727 UUGAGGC MIMAT0021987 MIMAT0021988 3 28511687 28511748 + Osteichthyes Osteichthyes No 1
Dre-Mir-727-v2 dre-mir-727 MIR-727 UUGAGGC MIMAT0003755 MIMAT0003756 chr24 26185425 26185487 + Osteichthyes Osteichthyes No 1
Aca-Mir-737 None MIR-737 UUUUUUU None None GL343245.1 1554419 1554479 - Osteichthyes Osteichthyes No
Ami-Mir-737 ami-mir-737 MIR-737 UUUUUUU MIMAT0038307 None JH732060 935778 935838 - Osteichthyes Osteichthyes Unknown
Cli-Mir-737 cli-mir-737 MIR-737 UUUUUUU MIMAT0038667 None scaffold244 3380836 3380896 - Osteichthyes Osteichthyes Unknown
Cpi-Mir-737 cpi-mir-737 MIR-737 UUUUUUU MIMAT0037908 None JH584476 630875 630935 - Osteichthyes Osteichthyes Unknown
Dre-Mir-737 dre-mir-737 MIR-737 UUUUUUU MIMAT0032013 MIMAT0003768 chr18 45962916 45962976 + Osteichthyes Osteichthyes No 1 1
Oan-Mir-737 None MIR-737 UUUUUUU None None NC_041728.1 132317247 132317307 + Osteichthyes Osteichthyes No
Dre-Mir-7147 dre-mir-7147 MIR-7147 GUACCAU MIMAT0028205 None chr24 10948075 10948132 - Osteichthyes Osteichthyes No
Xtr-Mir-7147 None MIR-7147 GUACCAU None None KB021656 7549076 7549134 - Osteichthyes Osteichthyes Unknown

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