MirGeneDB ID | Cbr-Mir-67 |
Family name |
MIR-67 (all species) |
Seed |
ACUCAUU |
Species |
Roundworm (Caenorhabditis briggsae) |
MiRBase ID |
cbr-mir-67
|
Paralogues |
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Orthologues |
Aae-Mir-67-v1
Aae-Mir-67-v2
Asu-Mir-67
Bge-Mir-67
Cel-Mir-67
Cgi-Mir-67-P4
Cgi-Mir-67-P5
Cgi-Mir-67-P6
Csc-Mir-67
Cte-Mir-67
Dan-Mir-67-v1
Dan-Mir-67-v2
Dma-Mir-67
Dme-Mir-67-v1
Dme-Mir-67-v2
Dme-Mir-67-v3
Dmo-Mir-67-v1
Dmo-Mir-67-v2
Dpu-Mir-67
Dsi-Mir-67-v1
Dsi-Mir-67-v2
Dsi-Mir-67-v3
Dya-Mir-67-v1
Dya-Mir-67-v2
Dya-Mir-67-v3
Efe-Mir-67-P1
Efe-Mir-67-P2
Efe-Mir-67-P3
Hme-Mir-67-v1
Hme-Mir-67-v2
Isc-Mir-67
Lan-Mir-67
Lgi-Mir-67
Lpo-Mir-67-P7
Lpo-Mir-67-P8
Lpo-Mir-67-P9
Lpo-Mir-67-P10
Lpo-Mir-67-P11
Npo-Mir-67
Obi-Mir-67
Ovu-Mir-67
Sme-Mir-67
Tca-Mir-67-v1
Tca-Mir-67-v2
Tca-Mir-67-v3
|
Node of Origin (locus) |
Protostomia
|
Node of Origin (family) |
Protostomia
|
Genome context (CB4) |
III: 4112596-4112663 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUUAUUCCUAAAAUUCUAGAUAUUUCGAUCAACUCAUUCUGCUGGUUGUUAUGCUGACAAUUGAUGAUUAAGCAUCACAACCUCCUAGAAAGAGUAGACCGAUUCUAUCUUAUCUUUUUACGUAUUUA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUUAUUCCUAAAAUUCU- UU- A A A CU-| U CUGACAAUU
AGAUA UCG UC ACUC UUCUG GGUUGU AUG \
UCUAU AGC AG UGAG AAGAU CCAACA UAC G
AUUUAUGCAUUUUUCUAU CUU C A A CCU^ C GAAUUAGUA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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01 |
02 |
03 |
04 |
05 |
06 |
07 |
08 |
09 |
10 |
11 |
12 |
13 |
14 |
15 |
16 |
Cb |
Ea |
Ma |
Yo |
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Mature sequence |
Cbr-Mir-67_5p |
mirBase accession | None |
Sequence |
0- AACUCAUUCUGCUGGUUGUUAUG -23
Get sequence
|
Co-mature sequence |
Cbr-Mir-67_3p |
mirBase accession | MIMAT0000480 |
Sequence |
44- UCACAACCUCCUAGAAAGAGUAGA -68
Get sequence
|