Mir-67

MirGeneDB ID

Cbr-Mir-67

Family name

MIR-67 (all species)

Species

Roundworm (Caenorhabditis briggsae)

MiRBase ID

cbr-mir-67

Paralogues

Orthologues

Aae-Mir-67-v1 Aga-Mir-67-v1 Agr-Mir-67-v1 Asu-Mir-67 Bge-Mir-67 Cel-Mir-67 Csc-Mir-67-P12 Csc-Mir-67-P13 Cte-Mir-67 Dan-Mir-67-v1 Dgr-Mir-67 Dlo-Mir-67-P14-v1 Dlo-Mir-67-P15-v1 Dma-Mir-67 Dme-Mir-67-v1 Dmo-Mir-67-v1 Dpu-Mir-67 Dsi-Mir-67-v1 Dya-Mir-67-v1 Eba-Mir-67-v1 Efe-Mir-67-P1 Efe-Mir-67-P2 Efe-Mir-67-P3 Egr-Mir-67 Gpa-Mir-67-P12-v1 Gpa-Mir-67-P13-v1 Gsa-Mir-67 Hme-Mir-67-v1 Hru-Mir-67 Isc-Mir-67 Lan-Mir-67 Lgi-Mir-67 Lpo-Mir-67-P7 Lpo-Mir-67-P8 Lpo-Mir-67-P9 Lpo-Mir-67-P10 Lpo-Mir-67-P11 Mgi-Mir-67-P4 Mgi-Mir-67-P5 Mgi-Mir-67-P6 Mom-Mir-67-v1 Npo-Mir-67 Obi-Mir-67 Ofu-Mir-67 Ovu-Mir-67 Pau-Mir-67 Pca-Mir-67 Pcr-Mir-67-v1 Pdu-Mir-67 Pve-Mir-67-v1 Rph-Mir-67-v1 Sma-Mir-67 Sme-Mir-67 Snu-Mir-67 Tca-Mir-67-v1 Tur-Mir-67 War-Mir-67-v1

Node of Origin (locus)

Protostomia

Node of Origin (family)

Protostomia

Genome context
(CB4)

III: 4112596-4112663 [+] Ensembl

Seed

ACUCAUU

Precursor
(pre-Mir +30nt flank)

UUUAUUCCUAAAAUUCUAGAUAUUUCGAUCAACUCAUUCUGCUGGUUGUUAUGCUGACAAUUGAUGAUUAAGCAUCACAACCUCCUAGAAAGAGUAGACCGAUUCUAUCUUAUCUUUUUACGUAUUUA

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Structure

        10         20         30        40         50        60   
UUUAUUCCUAAAAUUCU-     UU-   A  A    A     CU-|     U   CUGACAAUU 
                  AGAUA   UCG UC ACUC UUCUG   GGUUGU AUG         \
                  UCUAU   AGC AG UGAG AAGAU   CCAACA UAC         G
AUUUAUGCAUUUUUCUAU     CUU   C  A    A     CCU^     C   GAAUUAGUA 
      120       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

Tissue expression

Ea	Ma	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Yo	Yo

Mature sequence

Cbr-Mir-67_5p

mirBase accession

None

Sequence

0- AACUCAUUCUGCUGGUUGUUAUG -23

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Co-mature sequence

Cbr-Mir-67_3p

mirBase accession

MIMAT0000480

Sequence

44- UCACAACCUCCUAGAAAGAGUAGA -68

Get sequence