Mir-67

MirGeneDB ID

Bge-Mir-67

Family name

MIR-67 (all species)

Species

Cockroach (Blattella germanica)

MiRBase ID

Paralogues

Orthologues

Aae-Mir-67-v1 Aga-Mir-67-v1 Agr-Mir-67-v1 Asu-Mir-67 Cbr-Mir-67 Cel-Mir-67 Csc-Mir-67-P12 Csc-Mir-67-P13 Cte-Mir-67 Dan-Mir-67-v1 Dgr-Mir-67 Dlo-Mir-67-P14-v1 Dlo-Mir-67-P15-v1 Dma-Mir-67 Dme-Mir-67-v1 Dmo-Mir-67-v1 Dpu-Mir-67 Dsi-Mir-67-v1 Dya-Mir-67-v1 Eba-Mir-67-v1 Efe-Mir-67-P1 Efe-Mir-67-P2 Efe-Mir-67-P3 Egr-Mir-67 Gpa-Mir-67-P12-v1 Gpa-Mir-67-P13-v1 Gsa-Mir-67 Hme-Mir-67-v1 Hru-Mir-67 Isc-Mir-67 Lan-Mir-67 Lgi-Mir-67 Lpo-Mir-67-P7 Lpo-Mir-67-P8 Lpo-Mir-67-P9 Lpo-Mir-67-P10 Lpo-Mir-67-P11 Mgi-Mir-67-P4 Mgi-Mir-67-P5 Mgi-Mir-67-P6 Mom-Mir-67-v1 Npo-Mir-67 Obi-Mir-67 Ofu-Mir-67 Ovu-Mir-67 Pau-Mir-67 Pca-Mir-67 Pcr-Mir-67-v1 Pdu-Mir-67 Pve-Mir-67-v1 Rph-Mir-67-v1 Sma-Mir-67 Sme-Mir-67 Snu-Mir-67 Tca-Mir-67-v1 Tur-Mir-67 War-Mir-67-v1

Node of Origin (locus)

Protostomia

Node of Origin (family)

Protostomia

Genome context
(Bger_2.0)

KZ615758.1: 42405-42465 [-] Ensembl

Seed

CACAACC

Precursor
(pre-Mir +30nt flank)

AGAGAAAGGAUCUUACUGGCUAGCUUGGUUACUCACUCAACCUGGGUGUGAUGUGUUUAUGGAGCCCAUCACAACCUCCUUGAGUGAGCGACUAGGCGCGCCGAGUUCGUCUGGAUUUCGU

Get precursor sequence

Structure

        10          20        30        40        50          
AGAGAAAGGAUCUUACU--|  UA       UA         CCU  G       UGUUUA 
                   GGC  GCUUGGU  CUCACUCAA   GG UGUGAUG      \
                   CCG  CGGAUCA  GAGUGAGUU   CC ACACUAC      U
UGCUUUAGGUCUGCUUGAG^  CG       GC         CCU  A       CCGAGG 
 .       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17), UGUG in loop

Tissue expression

Ad	Ad	Co	Co	Di	Di	Eg	Eg	Em	Em	Em	Em	Em	Em	Em	Em	Em	Em	Ny	Ny	Ny	Ny	Ny	Ny	Ny	Ny	Ov

Star sequence

Bge-Mir-67_5p*

mirBase accession

None

Sequence

0- ACUCACUCAACCUGGGUGUGAUG -23

Get sequence

Mature sequence

Bge-Mir-67_3p

mirBase accession

None

Sequence

38- UCACAACCUCCUUGAGUGAGCGA -61

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