MirGeneDB ID | Snu-Mir-67 |
Family name |
MIR-67 (all species) |
Species |
Peanut worm (Sipunculus nudus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Aae-Mir-67-v1
Aga-Mir-67-v1
Agr-Mir-67-v1
Asu-Mir-67
Bge-Mir-67
Cbr-Mir-67
Cel-Mir-67
Csc-Mir-67-P12
Csc-Mir-67-P13
Cte-Mir-67
Dan-Mir-67-v1
Dgr-Mir-67
Dlo-Mir-67-P14-v1
Dlo-Mir-67-P15-v1
Dma-Mir-67
Dme-Mir-67-v1
Dmo-Mir-67-v1
Dpu-Mir-67
Dsi-Mir-67-v1
Dya-Mir-67-v1
Eba-Mir-67-v1
Efe-Mir-67-P1
Efe-Mir-67-P2
Efe-Mir-67-P3
Egr-Mir-67
Gpa-Mir-67-P12-v1
Gpa-Mir-67-P13-v1
Gsa-Mir-67
Hme-Mir-67-v1
Hru-Mir-67
Isc-Mir-67
Lan-Mir-67
Lgi-Mir-67
Lpo-Mir-67-P7
Lpo-Mir-67-P8
Lpo-Mir-67-P9
Lpo-Mir-67-P10
Lpo-Mir-67-P11
Mgi-Mir-67-P4
Mgi-Mir-67-P5
Mgi-Mir-67-P6
Mom-Mir-67-v1
Npo-Mir-67
Obi-Mir-67
Ofu-Mir-67
Ovu-Mir-67
Pau-Mir-67
Pca-Mir-67
Pcr-Mir-67-v1
Pdu-Mir-67
Pve-Mir-67-v1
Rph-Mir-67-v1
Sma-Mir-67
Sme-Mir-67
Tca-Mir-67-v1
Tur-Mir-67
War-Mir-67-v1
|
Node of Origin (locus) |
Protostomia
|
Node of Origin (family) |
Protostomia
|
Genome context (GCA_026874595.1_ASM2687459v1_Sipunculus_nudus) |
CM049312.1: 65068023-65068086 [+]
|
Seed |
CACAACC |
Precursor (pre-Mir +30nt flank) |
UGAGUCACUUGACAAAUUCUCGUCUCGAUAACCUCAUCUGUGGUGUUGUGAUGUUGCCAGAACGAGUUCAUCACAACCUGCAUGAAUGGGGUAACCGUGACUGGGAGAACAUCAUGAAUGGGGU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UGAGUCACUUGACAAAU- - U AUA - -| UG U UUGCCAG
UCUC GUC CG ACCUCA UC UG G GUUGUGAUG \
AGGG CAG GC UGGGGU AG AC C CAACACUAC A
UGGGGUAAGUACUACAAG U U CAA A U^ GU - UUGAGCA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Snu-Mir-67_5p* |
mirBase accession | None |
Sequence |
0- ACCUCAUCUGUGGUGUUGUGAUG -23
Get sequence
|
Mature sequence |
Snu-Mir-67_3p |
mirBase accession | None |
Sequence |
40- UCACAACCUGCAUGAAUGGGGUAA -64
Get sequence
|