MirGeneDB 3.0
MirGeneDB ID

Egr-Mir-67

Family name MIR-67 (all species)
Species Hydatid worm (Echinococcus granulosus)
MiRBase ID egr-mir-307
Paralogues
Orthologues Aae-Mir-67-v1  Aga-Mir-67-v1  Agr-Mir-67-v1  Asu-Mir-67  Bge-Mir-67  Cbr-Mir-67  Cel-Mir-67  Csc-Mir-67-P12  Csc-Mir-67-P13  Cte-Mir-67  Dan-Mir-67-v1  Dgr-Mir-67  Dlo-Mir-67-P14-v1  Dlo-Mir-67-P15-v1  Dma-Mir-67  Dme-Mir-67-v1  Dmo-Mir-67-v1  Dpu-Mir-67  Dsi-Mir-67-v1  Dya-Mir-67-v1  Eba-Mir-67-v1  Efe-Mir-67-P1  Efe-Mir-67-P2  Efe-Mir-67-P3  Gpa-Mir-67-P12-v1  Gpa-Mir-67-P13-v1  Gsa-Mir-67  Hme-Mir-67-v1  Hru-Mir-67  Isc-Mir-67  Lan-Mir-67  Lgi-Mir-67  Lpo-Mir-67-P7  Lpo-Mir-67-P8  Lpo-Mir-67-P9  Lpo-Mir-67-P10  Lpo-Mir-67-P11  Mgi-Mir-67-P4  Mgi-Mir-67-P5  Mgi-Mir-67-P6  Mom-Mir-67-v1  Npo-Mir-67  Obi-Mir-67  Ofu-Mir-67  Ovu-Mir-67  Pau-Mir-67  Pca-Mir-67  Pcr-Mir-67-v1  Pdu-Mir-67  Pve-Mir-67-v1  Rph-Mir-67-v1  Sma-Mir-67  Sme-Mir-67  Snu-Mir-67  Tca-Mir-67-v1  Tur-Mir-67  War-Mir-67-v1 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_000524195.1_ASM52419v1_Egranulosus)		 APAU02000021.1: 217704-217777 [+] UCSC Ensembl
Seed CACAACC
Precursor
(pre-Mir +30nt flank)		 
GUGCGUUGACAUCUGUAGGCAGACGCAGCUCCUCAUCCCGUGGGUUGAGCGAUGCCUUUGUGUUCUGCACCUCUAUGCGCAUCACAACCUACUUGAUUGAGGGGAAUAUCUGCCUUGAGCACCUACGUGACGUU
Get precursor sequence
Structure
        10           20        30         40        50        60       
GUGCGUUGACAUCUGUA---|     CGCAG       -  CC        AGC    CCUUUGUGUUCU 
                    GGCAGA     CUCCUCA UC  GUGGGUUG   GAUG            \
                    CCGUCU     GGGGAGU AG  CAUCCAAC   CUAC            G
UUGCAGUGCAUCCACGAGUU^     AUAA-       U  UU        A--    GCGUAUCUCCAC 
  130       120       110        100        90          80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Eg Eg Ev Ev Ad Fe Fe Hy Hy Hy Li Li Li Mi Mi Mi Po Po Po Po Po Po Po Pr Pr Pr Sm
Star sequence

Egr-Mir-67_5p*
mirBase accessionMIMAT0041335
Sequence 
0- CCUCAUCCCGUGGGUUGAGCGAUG -24
Get sequence
Mature sequence

Egr-Mir-67_3p
mirBase accessionMIMAT0041336
Sequence 
51- UCACAACCUACUUGAUUGAGGGG -74
Get sequence