MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-67-P12

Family name MIR-67 (all species)
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues Gpa-Mir-67-P13-v1 
Orthologues Asu-Mir-67  Bge-Mir-67  Cbr-Mir-67  Cel-Mir-67  Csc-Mir-67-P12  Cte-Mir-67  Dgr-Mir-67  Dma-Mir-67  Dpu-Mir-67  Egr-Mir-67  Gsa-Mir-67  Hru-Mir-67  Isc-Mir-67  Lan-Mir-67  Lgi-Mir-67  Npo-Mir-67  Obi-Mir-67  Ofu-Mir-67  Ovu-Mir-67  Pau-Mir-67  Pca-Mir-67  Pdu-Mir-67  Sma-Mir-67  Sme-Mir-67  Snu-Mir-67  Tur-Mir-67 
Node of Origin (locus) G. pallidipes
Node of Origin (family) Protostomia
Genome context
(GpalI1)		 Scaffold68: 383021-383084 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-67-P12-v1)		 Mir-67-P12-v1 Scaffold68: 383021-383084 [+] Ensembl
Mir-67-P12-v2 Scaffold68: 383021-383084 [+] Ensembl
Variant

Gpa-Mir-67-P12-v1
Seed CACAACC
Precursor
(pre-Mir +30nt flank)		 
ACGACUGUAAUAAUAUUUUGUCUUGCUUUGACUCACUCAACCUGGGUGUGAUGUUUUAGAUCUGGUAUCCAUCACAACCUCCUUGAGUGAGCGAUAGCAGGAUAGAAUUUCCACACAUACACAC
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Structure
        10          20         30        40        50        60 
ACGACUGUAAUAAUAUU--          -|  A         CCU  G       UUUUAGA 
                   UUGUCUUGCU UUG CUCACUCAA   GG UGUGAUG       U
                   GAUAGGACGA AGC GAGUGAGUU   CC ACACUAC       C
CACACAUACACACCUUUAA          U^  -         CCU  A       CUAUGGU 
  120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To To To To To To To To To To To To To To To To To To To To To
Star sequence

Gpa-Mir-67-P12-v1_5p*
mirBase accessionNone
Sequence 
0- ACUCACUCAACCUGGGUGUGAUG -23
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Mature sequence

Gpa-Mir-67-P12-v1_3p
mirBase accessionNone
Sequence 
41- UCACAACCUCCUUGAGUGAGCGA -64
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Variant

Gpa-Mir-67-P12-v2
Seed ACAACCU
Precursor
(pre-Mir +30nt flank)		 
ACGACUGUAAUAAUAUUUUGUCUUGCUUUGACUCACUCAACCUGGGUGUGAUGUUUUAGAUCUGGUAUCCAUCACAACCUCCUUGAGUGAGCGAUAGCAGGAUAGAAUUUCCACACAUACACAC
Get precursor sequence
Structure
        10          20         30        40        50        60 
ACGACUGUAAUAAUAUU--          -|  A         CCU  G      GUUUUAGA 
                   UUGUCUUGCU UUG CUCACUCAA   GG UGUGAU        U
                   GAUAGGACGA AGC GAGUGAGUU   CC ACACUA        C
CACACAUACACACCUUUAA          U^  -         CCU  A      CCUAUGGU 
  120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To To To To To To To To To To To To To To To To To To To To To
Star sequence

Gpa-Mir-67-P12-v2_5p*
mirBase accessionNone
Sequence 
0- ACUCACUCAACCUGGGUGUGAU -22
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Mature sequence

Gpa-Mir-67-P12-v2_3p
mirBase accessionNone
Sequence 
42- CACAACCUCCUUGAGUGAGCGA -64
Get sequence