Mir-67

MirGeneDB ID

Asu-Mir-67

Family name

MIR-67 (all species)

Species

Large roundworm (Ascaris suum)

MiRBase ID

asu-mir-67

Paralogues

Orthologues

Aae-Mir-67-v1 Aga-Mir-67-v1 Agr-Mir-67-v1 Bge-Mir-67 Cbr-Mir-67 Cel-Mir-67 Csc-Mir-67-P12 Csc-Mir-67-P13 Cte-Mir-67 Dan-Mir-67-v1 Dgr-Mir-67 Dlo-Mir-67-P14-v1 Dlo-Mir-67-P15-v1 Dma-Mir-67 Dme-Mir-67-v1 Dmo-Mir-67-v1 Dpu-Mir-67 Dsi-Mir-67-v1 Dya-Mir-67-v1 Eba-Mir-67-v1 Efe-Mir-67-P1 Efe-Mir-67-P2 Efe-Mir-67-P3 Egr-Mir-67 Gpa-Mir-67-P12-v1 Gpa-Mir-67-P13-v1 Gsa-Mir-67 Hme-Mir-67-v1 Hru-Mir-67 Isc-Mir-67 Lan-Mir-67 Lgi-Mir-67 Lpo-Mir-67-P7 Lpo-Mir-67-P8 Lpo-Mir-67-P9 Lpo-Mir-67-P10 Lpo-Mir-67-P11 Mgi-Mir-67-P4 Mgi-Mir-67-P5 Mgi-Mir-67-P6 Mom-Mir-67-v1 Npo-Mir-67 Obi-Mir-67 Ofu-Mir-67 Ovu-Mir-67 Pau-Mir-67 Pca-Mir-67 Pcr-Mir-67-v1 Pdu-Mir-67 Pve-Mir-67-v1 Rph-Mir-67-v1 Sma-Mir-67 Sme-Mir-67 Snu-Mir-67 Tca-Mir-67-v1 Tur-Mir-67 War-Mir-67-v1

Node of Origin (locus)

Protostomia

Node of Origin (family)

Protostomia

Genome context
(ASU_PRJNA80881_plustraces)

Scaffold214: 388322-388383 [+]

Seed

CACAACC

Precursor
(pre-Mir +30nt flank)

AGUGUAGCCAUCUUCUGCUCGAGGGCACUUAGCUCGCUCGGCUGGUUGUUAGAUGUUUCUGCUGUUCAUCACAACCUCCUUGAGUGAGUUGAAAGCCCUCAUGCUGACGAAGCGAUCUUCAU

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Structure

        10        20          30        40         50        60 
AGUGUAGCCAUCUUCUGCUC--      AC             CU-|     UA    UUUCU 
                      GAGGGC  UUAGCUCGCUCGG   GGUUGU  GAUG     \
                      CUCCCG  AGUUGAGUGAGUU   CCAACA  CUAC     G
UACUUCUAGCGAAGCAGUCGUA      AA             CCU^     --    UUGUC 
120       110       100        90        80          70

Deep sequencing

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3' NTU

Unknown

Motifs

Tissue expression

Ce	Em	Em	Em	Em	Em	Em	Em	Em	Em	Em	La	Ov	Se	Sp	Te	Zy

Star sequence

Asu-Mir-67_5p*

mirBase accession

MIMAT0021523

Sequence

0- AGCUCGCUCGGCUGGUUGUUAGAUG -25

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Mature sequence

Asu-Mir-67_3p (predicted)

mirBase accession

MIMAT0021524

Sequence

38- UCACAACCUCCUUGAGUGAGUUGA -62

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