| MirGeneDB ID | Cte-Mir-67 |
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| Family name |
MIR-67 (all species) |
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| Species |
Polychaete worm (Capitella teleta) |
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| MiRBase ID |
cte-mir-67
|
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| Paralogues |
|
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| Orthologues |
Aae-Mir-67-v1
Aga-Mir-67-v1
Agr-Mir-67-v1
Asu-Mir-67
Bge-Mir-67
Cbr-Mir-67
Cel-Mir-67
Csc-Mir-67-P12
Csc-Mir-67-P13
Dan-Mir-67-v1
Dgr-Mir-67
Dlo-Mir-67-P14-v1
Dlo-Mir-67-P15-v1
Dma-Mir-67
Dme-Mir-67-v1
Dmo-Mir-67-v1
Dpu-Mir-67
Dsi-Mir-67-v1
Dya-Mir-67-v1
Eba-Mir-67-v1
Efe-Mir-67-P1
Efe-Mir-67-P2
Efe-Mir-67-P3
Egr-Mir-67
Gpa-Mir-67-P12-v1
Gpa-Mir-67-P13-v1
Gsa-Mir-67
Hme-Mir-67-v1
Hru-Mir-67
Isc-Mir-67
Lan-Mir-67
Lgi-Mir-67
Lpo-Mir-67-P7
Lpo-Mir-67-P8
Lpo-Mir-67-P9
Lpo-Mir-67-P10
Lpo-Mir-67-P11
Mgi-Mir-67-P4
Mgi-Mir-67-P5
Mgi-Mir-67-P6
Mom-Mir-67-v1
Npo-Mir-67
Obi-Mir-67
Ofu-Mir-67
Ovu-Mir-67
Pau-Mir-67
Pca-Mir-67
Pcr-Mir-67-v1
Pdu-Mir-67
Pve-Mir-67-v1
Rph-Mir-67-v1
Sma-Mir-67
Sme-Mir-67
Snu-Mir-67
Tca-Mir-67-v1
Tur-Mir-67
War-Mir-67-v1
|
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| Node of Origin (locus) |
Protostomia
|
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| Node of Origin (family) |
Protostomia
|
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Genome context
(Capitella_teleta_v1.0) |
CAPTEscaffold_664: 25476-25536 [+]
Ensembl
|
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| Seed |
CACAACC |
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Precursor
(pre-Mir +30nt flank) |
CAUUUCUUUGGCAAUCUGCCCAGCGAUCUUACCUCAUUCAGUGGUGUUGCGAUGCUGGAAGCGCUCAUCACAACCUGCAUGAAUGAGGUAAGGUCAUGGAGCAUGCGCAACCAACGCCUCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CAUUUCUUUGGCAAUCU-- -| GC - UG U C CUGGA
GC CCA GAUCUUACCUCAUUCA G G GUUG GAUG \
CG GGU CUGGAAUGGAGUAAGU C C CAAC CUAC A
ACUCCGCAACCAACGCGUA A^ A- A GU - A UCGCG
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Cte-Mir-67_5p* |
| mirBase accession | None |
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| Sequence |
0- ACCUCAUUCAGUGGUGUUGCGAUG -24
Get sequence
|
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| Mature sequence |
Cte-Mir-67_3p |
| mirBase accession | MIMAT0009675 |
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| Sequence |
37- UCACAACCUGCAUGAAUGAGGUAA -61
Get sequence
|
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