MirGeneDB

143 Blattella germanica microRNA genes
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Bge-Bantam None BANTAM GAGAUCA None None KZ614636.1 591905 591964 + Protostomia Protostomia No
Bge-Iab-4 None IAB-4 CGUAUAC None None KZ615014.1 687806 687863 + Arthropoda Arthropoda No 1
Bge-Iab-4-as None IAB-4 UACGUAU None None KZ615014.1 687803 687863 - Pancrustacea Arthropoda No 1
Bge-Let-7 None LET-7 GAGGUAG None None KZ616465.1 159006 159074 + Bilateria Bilateria No
Bge-Mir-1 None MIR-1 GGAAUGU None None KZ614843.1 338349 338408 + Bilateria Bilateria No 1
Bge-Mir-2-o66-v1 None MIR-2 AUCACAG None None KZ615436.1 350982 351043 - B. germanica Protostomia No 1
Bge-Mir-2-o66-v2 None MIR-2 CACAGCC None None KZ615436.1 350982 351043 - B. germanica Protostomia No 1 1
Bge-Mir-2-o67-v1 None MIR-2 AUCACAG None None KZ615436.1 353745 353804 - B. germanica Protostomia No 1 1
Bge-Mir-2-o67-v2 None MIR-2 CACAGCC None None KZ615436.1 353745 353804 - B. germanica Protostomia No 1 1 1
Bge-Mir-2-o68-v1 None MIR-2 AUCACAG None None KZ615136.1 496135 496195 + B. germanica Protostomia No 1
Bge-Mir-2-o68-v2 None MIR-2 CACAGCC None None KZ615136.1 496135 496195 + B. germanica Protostomia No 1
Bge-Mir-2-o69 None MIR-2 AGUCAAA None None KZ615436.1 353858 353916 - B. germanica Protostomia No 1
Bge-Mir-2-o70 None MIR-2 AUCACAG None None KZ615136.1 496273 496334 + B. germanica Protostomia No 1
Bge-Mir-2-P7 None MIR-2 AUCACAG None None KZ614377.1 360106 360165 + Neoptera Protostomia No 1 1
Bge-Mir-3-o2a-v1 None MIR-3 CACUGGG None None KZ618317.1 56244 56302 - B. germanica Pancrustacea No 1
Bge-Mir-3-o2a-v2 None MIR-3 UCACUGG None None KZ618317.1 56244 56302 - B. germanica Pancrustacea No 1
Bge-Mir-3-o2b-v1 None MIR-3 CACUGGG None None KZ614999.1 53646 53704 - B. germanica Pancrustacea No 1
Bge-Mir-3-o2b-v2 None MIR-3 UCACUGG None None KZ614999.1 53646 53704 - B. germanica Pancrustacea No 1
Bge-Mir-3-o3-v1 None MIR-3 CACUGGG None None KZ614999.1 54531 54589 - B. germanica Pancrustacea No 1
Bge-Mir-3-o3-v2 None MIR-3 UCACUGG None None KZ614999.1 54531 54589 - B. germanica Pancrustacea No 1
Bge-Mir-7 None MIR-7 GGAAGAC None None KZ614679.1 572341 572400 - Bilateria Bilateria No 1
Bge-Mir-8 None MIR-8 AAUACUG None None KZ615998.1 210396 210454 + Bilateria Bilateria No 1
Bge-Mir-9-o11 None MIR-9 CUUUGGU None None KZ614731.1 666805 666865 - B. germanica Bilateria No 1 1
Bge-Mir-9-o12-v1 None MIR-9 CUUUGGU None None KZ614731.1 668640 668700 - B. germanica Bilateria No 1
Bge-Mir-9-o12-v2 None MIR-9 UUUGGUG None None KZ614731.1 668641 668699 - B. germanica Bilateria No 1
Bge-Mir-9-o13 None MIR-9 CUUUGGU None None KZ614731.1 672851 672910 - B. germanica Bilateria No 1
Bge-Mir-9-o14 None MIR-9 CUUUGGU None None KZ616519.1 74858 74917 + B. germanica Bilateria No 1 1 1
Bge-Mir-10-P1-v1 None MIR-10 CCCUGUA None None KZ614729.1 496542 496599 - Arthropoda Eumetazoa No 1
Bge-Mir-10-P1-v2 None MIR-10 ACCCUGU None None KZ614729.1 496541 496600 - Arthropoda Eumetazoa No 1
Bge-Mir-10-P2 None MIR-10 ACCCGUA None None KZ616465.1 156667 156723 + Bilateria Eumetazoa No 1 1
Bge-Mir-10-P3 None MIR-10 CCCUGAG None None KZ616465.1 216644 216704 + Bilateria Eumetazoa No 1 1
Bge-Mir-10-P4 None MIR-10 AAGCUCG None None KZ614729.1 243285 243350 + Protostomia Eumetazoa No
Bge-Mir-12 None MIR-12 GAGUAUU None None KZ614411.1 688819 688880 - Protostomia Protostomia No 1 1
Bge-Mir-14 None MIR-14 CAGUCUU None None KZ617020.1 136664 136723 - Pterygota Pterygota No 1
Bge-Mir-22-P2 None MIR-22 AGCUGCC None None KZ616253.1 43902 43964 + Bilateria Bilateria No 1 1
Bge-Mir-29-P1c None MIR-29 AGCACCA None None KZ615958.1 104379 104439 - Pancrustacea Bilateria No
Bge-Mir-29-P1d None MIR-29 AGCACCA None None KZ614377.1 366509 366566 + Pancrustacea Bilateria No 1 1
Bge-Mir-29-P2e None MIR-29 AGCACCA None None KZ614594.1 931314 931379 - B. germanica Bilateria No 1
Bge-Mir-29-P2f None MIR-29 AGCACCA None None JPZV02062171.1 158 223 + B. germanica Bilateria No 1
Bge-Mir-31 None MIR-31 GGCAAGA None None KZ614513.1 1183518 1183577 + Bilateria Bilateria No 1
Bge-Mir-33 None MIR-33 UGCAUUG None None KZ617909.1 260967 261026 - Bilateria Bilateria Unknown 1 1
Bge-Mir-34 None MIR-34 GGCAGUG None None KZ615986.1 27020 27078 - Bilateria Bilateria No 1 1
Bge-Mir-36 None MIR-36 GUGGAUU None None KZ614999.1 58272 58329 - Protostomia Protostomia No 1
Bge-Mir-67 None MIR-67 CACAACC None None KZ615758.1 42405 42465 - Protostomia Protostomia No 1 1 1
Bge-Mir-71 None MIR-71 GAAAGAC None None KZ615136.1 496024 496084 + Bilateria Bilateria No 1
Bge-Mir-76 None MIR-76 UCGUUGU None None KZ614541.1 626019 626079 + Bilateria Bilateria No 1
Bge-Mir-87-o22 None MIR-87 UGAGCAA None None KZ618078.1 9512 9567 - B. germanica Protostomia No 1
Bge-Mir-87-o23 None MIR-87 UGAGCAA None None KZ615904.1 366017 366074 - B. germanica Protostomia No
Bge-Mir-87-o24 None MIR-87 UGAGCAA None None KZ618078.1 8798 8855 - B. germanica Protostomia No
Bge-Mir-92-o63 None MIR-92 GUCCGUG None None KZ615620.1 336862 336921 + B. germanica Bilateria No 1
Bge-Mir-92-o64 None MIR-92 AUUGCAC None None KZ615620.1 336987 337043 + B. germanica Bilateria No
Bge-Mir-92-o65 None MIR-92 AUUGCAC None None KZ616963.1 116285 116343 - B. germanica Bilateria No 1
Bge-Mir-92-o66 None MIR-92 AUUGCAC None None KZ614500.1 94957 95013 + B. germanica Bilateria No 1
Bge-Mir-96-P2 None MIR-96 UUGGCAC None None KZ614838.1 241058 241116 - Bilateria Bilateria No
Bge-Mir-96-P3 None MIR-96 AUGGCAC None None KZ614838.1 267225 267283 - Bilateria Bilateria No 1
Bge-Mir-124 None MIR-124 GUGUUCA None None KZ614928.1 562913 562974 - Bilateria Bilateria No 1
Bge-Mir-133 None MIR-133 UGGUCCC None None KZ614843.1 685640 685704 + Bilateria Bilateria No 1 1
Bge-Mir-137-P13-v1 None MIR-137 UAUUGCU None None JPZV02060341.1 557 617 + B. germanica Bilateria No 1
Bge-Mir-137-P13-v2 None MIR-137 AUUGCUU None None JPZV02060341.1 557 617 + B. germanica Bilateria No 1
Bge-Mir-137-P14-v1 None MIR-137 UAUUGCU None None JPZV02066650.1 441 501 - B. germanica Bilateria No 1
Bge-Mir-137-P14-v2 None MIR-137 AUUGCUU None None JPZV02066650.1 441 501 - B. germanica Bilateria No 1
Bge-Mir-184 None MIR-184 GGACGGA None None KZ618025.1 156411 156471 + Bilateria Bilateria No 1
Bge-Mir-190 None MIR-190 GAUAUGU None None KZ615352.1 377439 377498 + Bilateria Bilateria No 1
Bge-Mir-193-P1 None MIR-193 ACUGGCC None None KZ618026.1 46387 46457 - Bilateria Bilateria No 1 1
Bge-Mir-193-P2 None MIR-193 AAUGCCC None None KZ618026.1 30334 30399 - Bilateria Bilateria No 1
Bge-Mir-210-v1 None MIR-210 GCUGCUG None None KZ615127.1 109417 109476 + Bilateria Bilateria No 1
Bge-Mir-210-v2 None MIR-210 GCUGCUG None None KZ615127.1 109417 109476 + Bilateria Bilateria No 1
Bge-Mir-216-P1 None MIR-216 AAUCUCA None None KZ614411.1 695302 695361 - Bilateria Bilateria No 1 1
Bge-Mir-216-P2 None MIR-216 AAUAUCA None None KZ614411.1 696520 696578 - Bilateria Bilateria No 1
Bge-Mir-219 None MIR-219 GGACUGU None None KZ614940.1 254374 254433 - Bilateria Bilateria No 1
Bge-Mir-252-P1-v1 None MIR-252 UAAGUAC None None KZ617672.1 79351 79412 - Bilateria Bilateria No 1 1
Bge-Mir-252-P1-v2 None MIR-252 AAGUACU None None KZ617672.1 79352 79411 - Bilateria Bilateria No 1
Bge-Mir-252-P2 None MIR-252 UAAGUAG None None KZ617672.1 113720 113781 - Bilateria Bilateria No 1
Bge-Mir-275 None MIR-275 CAGGUAC None None KZ616644.1 183402 183466 + Arthropoda Arthropoda Yes 1 1
Bge-Mir-276 None MIR-276 AGGAACU None None KZ614490.1 1972939 1972997 + Arthropoda Arthropoda No 1
Bge-Mir-277 None MIR-277 AAAUGCA None None KZ615986.1 42014 42078 - Protostomia Protostomia No
Bge-Mir-278 None MIR-278 CGGUGGG None None KZ615041.1 143304 143363 + Bilateria Bilateria No 1 1
Bge-Mir-279-o35 None MIR-279 GACUAGA None None KZ614498.1 736091 736150 - B. germanica Protostomia No 1
Bge-Mir-279-o36 None MIR-279 GACUAGA None None KZ614507.1 1095704 1095765 - B. germanica Protostomia No
Bge-Mir-279-o37 None MIR-279 GACUAGA None None KZ614992.1 536335 536392 - B. germanica Protostomia No 1
Bge-Mir-279-o38 None MIR-279 GACUAGA None None KZ614992.1 537892 537951 - B. germanica Protostomia No 1 1
Bge-Mir-279-o39 None MIR-279 GACUAGA None None KZ615200.1 181846 181905 - B. germanica Protostomia No 1
Bge-Mir-281 None MIR-281 AGAGAGC None None KZ615391.1 22996 23052 - Bilateria Bilateria No 1
Bge-Mir-282 None MIR-282 AGCCUCU None None JPZV02045158.1 15581 15646 + Pancrustacea Pancrustacea Unknown 1 1
Bge-Mir-305 None MIR-305 UUGUACU None None KZ616644.1 183539 183599 + Ecdysozoa Ecdysozoa No 1
Bge-Mir-306 None MIR-306 CAGGUAC None None KZ614731.1 668749 668804 - Pterygota Pterygota No 1 1
Bge-Mir-315 None MIR-315 UUUGAUU None None KZ616154.1 289529 289589 + Bilateria Bilateria No 1 1
Bge-Mir-316 None MIR-316 GUCUUUU None None KZ614922.1 160984 161046 - Pancrustacea Pancrustacea No 1
Bge-Mir-317 None MIR-317 GAACACA None None KZ615986.1 65403 65466 - Protostomia Protostomia No 1
Bge-Mir-375 None MIR-375 UUGUUCG None None KZ616959.1 103928 103987 - Bilateria Bilateria No 1
Bge-Mir-750 None MIR-750 CAGAUCU None None KZ615462.1 198724 198809 - Protostomia Protostomia No 1
Bge-Mir-927-P1 None MIR-927 UUAGAAU None None KZ614758.1 199474 199532 + Pterygota Pterygota No 1
Bge-Mir-927-P2-v1 None MIR-927 UUUAGAA None None KZ614944.1 401461 401525 + Pterygota Pterygota No 1 1
Bge-Mir-927-P2-v2 None MIR-927 UUAGAAU None None KZ614944.1 401462 401524 + Pterygota Pterygota No 1
Bge-Mir-929-v1 None MIR-929 AAUUGAC None None KZ620164.1 1254 1316 + Pterygota Pterygota Yes 1
Bge-Mir-929-v2 None MIR-929 AUUGACU None None KZ620164.1 1255 1315 + Pterygota Pterygota Yes
Bge-Mir-932 None MIR-932 CAAUUCC None None KZ617914.1 22888 22946 + Neoptera Neoptera No
Bge-Mir-965 None MIR-965 GGGAGAA None None KZ614839.1 771062 771120 - Pancrustacea Pancrustacea Yes 1 1
Bge-Mir-971-v1 None MIR-971 ACUCUAA None None KZ615707.1 119208 119269 + Pterygota Pterygota No 1
Bge-Mir-971-v2 None MIR-971 CACUCUA None None KZ615707.1 119207 119269 + Pterygota Pterygota No 1
Bge-Mir-1000 None MIR-1000 UAUUGUC None None KZ615968.1 16799 16859 + Pterygota Pterygota Unknown 1
Bge-Mir-1175 None MIR-1175 AGUGGAG None None KZ615462.1 194645 194703 - Protostomia Protostomia No 1
Bge-Mir-2001-P1 None MIR-2001 UUGUGAC None None KZ617672.1 125160 125225 - B. germanica Bilateria Unknown 1
Bge-Mir-2001-P2 None MIR-2001 UUGUGAC None None JPZV02062146.1 270 335 - B. germanica Bilateria Unknown 1
Bge-Mir-2765 None MIR-2765 GGUAACU None None KZ615342.1 441301 441361 + Pancrustacea Pancrustacea No 1 1
Bge-Mir-2796 None MIR-2796 UAGGCCG None None KZ614480.1 87921 87980 - Pterygota Pterygota No
Bge-Mir-3049 None MIR-3049 CGGGAAG None None KZ614976.1 254390 254450 + Pterygota Pterygota Unknown 1
Bge-Mir-3770 None MIR-3770 AUCCUGC None None KZ614626.1 48115 48174 - B. germanica B. germanica Unknown 1
Bge-Mir-6012 None MIR-6012 GGCUGAC None None KZ616466.1 152009 152075 - B. germanica B. germanica No 1
Bge-Novel-1-P1 None BGE-NOVEL-1 GUGAUGU None None KZ614827.1 26187 26245 + B. germanica B. germanica No
Bge-Novel-1-P2 None BGE-NOVEL-1 GUGAUGU None None KZ614827.1 22193 22251 + B. germanica B. germanica No 1
Bge-Novel-2-P1 None BGE-NOVEL-2 CUCGAAC None None JPZV02055629.1 521 576 - B. germanica B. germanica No 1
Bge-Novel-2-P2 None BGE-NOVEL-2 CUCGAAC None None KZ614580.1 781562 781617 - B. germanica B. germanica No 1
Bge-Novel-3 None BGE-NOVEL-3 AGGAAAG None None KZ614998.1 490211 490267 + B. germanica B. germanica No
Bge-Novel-4 None BGE-NOVEL-4 UCGUUCU None None KZ614366.1 1212825 1212881 - B. germanica B. germanica No 1
Bge-Novel-5 None BGE-NOVEL-5 GGACUUC None None KZ614421.1 901262 901321 - B. germanica B. germanica No
Bge-Novel-6-P1 None BGE-NOVEL-6 UGAAAUG None None KZ614441.1 1272250 1272309 + B. germanica B. germanica No 1
Bge-Novel-6-P2 None BGE-NOVEL-6 UGAAAUG None None KZ616355.1 282659 282718 - B. germanica B. germanica No 1
Bge-Novel-7 None BGE-NOVEL-7 UCAGUUC None None KZ614500.1 22408 22466 + B. germanica B. germanica No 1 1
Bge-Novel-8 None BGE-NOVEL-8 CUGGAGG None None KZ614500.1 28002 28061 + B. germanica B. germanica No 1 1
Bge-Novel-9-P1 None BGE-NOVEL-9 AUCUUAU None None KZ614500.1 80393 80452 + B. germanica B. germanica No
Bge-Novel-9-P2 None BGE-NOVEL-9 ACGAUAA None None KZ614500.1 82175 82234 + B. germanica B. germanica No
Bge-Novel-10-P1 None BGE-NOVEL-10 CGUUGUA None None KZ614500.1 92716 92772 + B. germanica B. germanica No 1 1
Bge-Novel-10-P2 None BGE-NOVEL-10 CGUUGUA None None KZ614500.1 92245 92301 + B. germanica B. germanica No 1 1
Bge-Novel-11 None BGE-NOVEL-11 GGUCAUG None None KZ614500.1 96730 96787 + B. germanica B. germanica No 1
Bge-Novel-12 None BGE-NOVEL-12 UACGAAC None None KZ614523.1 1698465 1698524 + B. germanica B. germanica No
Bge-Novel-13 None BGE-NOVEL-13 AUGUUAA None None KZ618990.1 32989 33049 + B. germanica B. germanica No 1
Bge-Novel-14 None BGE-NOVEL-14 GACUCCA None None KZ617118.1 382632 382690 + B. germanica B. germanica No 1 1
Bge-Novel-15 None BGE-NOVEL-15 AUUCUUC None None KZ616777.1 136291 136347 + B. germanica B. germanica No 1
Bge-Novel-17 None BGE-NOVEL-17 CUGCGAC None None KZ614569.1 131301 131358 - B. germanica B. germanica No 1
Bge-Novel-18-P1 None BGE-NOVEL-18 UCGGACU None None KZ614580.1 763451 763508 - B. germanica B. germanica No 1
Bge-Novel-18-P2 None BGE-NOVEL-18 UCGGACU None None KZ614580.1 776960 777017 - B. germanica B. germanica No 1
Bge-Novel-18-P3a None BGE-NOVEL-18 UUCGGAC None None KZ614580.1 782962 783018 - B. germanica B. germanica No
Bge-Novel-18-P3b None BGE-NOVEL-18 UUCGGAC None None KZ614580.1 779425 779481 - B. germanica B. germanica No
Bge-Novel-19 None BGE-NOVEL-19 AAGGCUC None None KZ614838.1 686992 687051 - B. germanica B. germanica No 1
Bge-Novel-20 None BGE-NOVEL-20 CGUAACC None None KZ614859.1 604497 604556 + B. germanica B. germanica No 1
Bge-Novel-21 None BGE-NOVEL-21 CACUGGA None None KZ614999.1 53381 53441 - B. germanica B. germanica No 1
Bge-Novel-22 None BGE-NOVEL-22 GUGGAUU None None KZ614999.1 58272 58329 - B. germanica B. germanica No 1
Bge-Novel-23 None BGE-NOVEL-23 AGAGAAA None None KZ615746.1 115738 115795 - B. germanica B. germanica No 1
Bge-Novel-24 None BGE-NOVEL-24 AUAGGCG None None KZ615746.1 116941 117000 - B. germanica B. germanica No
Bge-Novel-25 None BGE-NOVEL-25 AUCAGUC None None KZ616038.1 6151 6209 + B. germanica B. germanica No 1
Bge-Novel-26 None BGE-NOVEL-26 AUAUAAA None None KZ616140.1 57073 57133 + B. germanica B. germanica No 1
Bge-Novel-27 None BGE-NOVEL-27 CGGACGA None None KZ616280.1 215071 215131 + B. germanica B. germanica No 1 1

Get sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Get genome coordinates (GFF format)