MirGeneDB 3.0
MirGeneDB ID

Bge-Mir-1175

Family name MIR-1175 (all species)
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues Aae-Mir-1175  Aga-Mir-1175-v1  Agr-Mir-1175  Asu-Mir-1175  Ava-Mir-1175-P10  Ava-Mir-1175-P11  Bko-Mir-1175  Bpl-Mir-1175  Cte-Mir-1175  Dan-Mir-1175  Dgr-Mir-1175  Dlo-Mir-1175  Dma-Mir-1175  Dme-Mir-1175  Dmo-Mir-1175  Dpu-Mir-1175  Dsi-Mir-1175  Dya-Mir-1175-P3  Dya-Mir-1175-P4  Eba-Mir-1175  Efe-Mir-1175-P1  Efe-Mir-1175-P2  Gpa-Mir-1175  Gsa-Mir-1175  Gsp-Mir-1175  Hme-Mir-1175  Hru-Mir-1175  Isc-Mir-1175  Lan-Mir-1175  Lgi-Mir-1175  Llo-Mir-1175  Lpo-Mir-1175-P5  Lpo-Mir-1175-P6  Lpo-Mir-1175-P7  Mgi-Mir-1175  Mom-Mir-1175  Npo-Mir-1175  Obi-Mir-1175  Ofu-Mir-1175  Ovu-Mir-1175  Pau-Mir-1175  Pca-Mir-1175  Pcr-Mir-1175-P12-v1  Pcr-Mir-1175-P13  Pdu-Mir-1175  Pve-Mir-1175  Rph-Mir-1175  Sma-Mir-1175  Sme-Mir-1175-P8  Sme-Mir-1175-P9  Sne-Mir-1175  Snu-Mir-1175  Tca-Mir-1175  Tur-Mir-1175-v1  War-Mir-1175 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Bger_2.0)		 KZ615462.1: 194645-194703 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1175)		 Mir-1175 KZ615462.1: 194645-194703 [-] Ensembl
Mir-750 KZ615462.1: 198724-198809 [-] Ensembl
Seed AGUGGAG
Precursor
(pre-Mir +30nt flank)		 
AACGGGGGAUUAGCAAGUGGUUCUUGGACUAAGUGGAGAAGUGGUCUCUUCACUUUGAUUUUAAGUGAGAUUCAACUCCUCCAACUUAUUUCAGCCACGGCAGACUUCUUCAGAAGACA
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Structure
        10             20        30         40        50         
AACGGGGGAUUAGCAAG-----|   UCU    C     -    A   GGUC   U    UUGA 
                      UGGU   UGGA UAAGU GGAG AGU    UCU CACU    \
                      ACCG   ACUU AUUCA CCUC UCA    AGA GUGA    U
ACAGAAGACUUCUUCAGACGGC^   ---    U     A    C   ACUU   -    AUUU 
       110       100           90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Ad Co Co Di Di Eg Eg Em Em Em Em Em Em Em Em Em Em Ny Ny Ny Ny Ny Ny Ny Ny Ov
Mature sequence

Bge-Mir-1175_5p
mirBase accessionNone
Sequence 
0- AAGUGGAGAAGUGGUCUCUUCACU -24
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Co-mature sequence

Bge-Mir-1175_3p
mirBase accessionNone
Sequence 
35- UGAGAUUCAACUCCUCCAACUUAU -59
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