MirGeneDB 3.0
MirGeneDB ID

Dya-Mir-1175-P3

Family name MIR-1175 (all species)
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues Dya-Mir-1175-P4 
Orthologues Aae-Mir-1175  Agr-Mir-1175  Asu-Mir-1175  Bge-Mir-1175  Bko-Mir-1175  Bpl-Mir-1175  Cte-Mir-1175  Dan-Mir-1175  Dgr-Mir-1175  Dlo-Mir-1175  Dma-Mir-1175  Dme-Mir-1175  Dmo-Mir-1175  Dpu-Mir-1175  Dsi-Mir-1175  Eba-Mir-1175  Gpa-Mir-1175  Gsa-Mir-1175  Gsp-Mir-1175  Hme-Mir-1175  Hru-Mir-1175  Isc-Mir-1175  Lan-Mir-1175  Lgi-Mir-1175  Llo-Mir-1175  Mgi-Mir-1175  Mom-Mir-1175  Npo-Mir-1175  Obi-Mir-1175  Ofu-Mir-1175  Ovu-Mir-1175  Pau-Mir-1175  Pca-Mir-1175  Pdu-Mir-1175  Pve-Mir-1175  Rph-Mir-1175  Sma-Mir-1175  Sne-Mir-1175  Snu-Mir-1175  Tca-Mir-1175  War-Mir-1175 
Node of Origin (locus) D. yakuba
Node of Origin (family) Protostomia
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)		 3L: 23128670-23128733 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1175-P3)		 Mir-1175-P4 3L: 23123731-23123794 [-] UCSC Ensembl
Mir-1175-P3 3L: 23128670-23128733 [-] UCSC Ensembl
Seed GAGAUUC
Precursor
(pre-Mir +30nt flank)		 
GGAUUUUCCACGAUCGGCGUGUCUUUGGCAAGUAGAAUAGCAGGCUUAUCACAUGUUUAACUCAAUCUGCUGUGAGAUUCUUCUAUUCUACUUUCGACAACACCCGUUAACAUCGAACCCCGAC
Get precursor sequence
Structure
        10           20        30        40        50        60  
GGAUUUUCCACGAUCGGC---|   CU    C           C   CUUA     UGUUUAAC 
                     GUGU  UUGG AAGUAGAAUAG AGG    UCACA        \
                     CACA  AGCU UUCAUCUUAUC UCU    AGUGU        U
CAGCCCCAAGCUACAAUUGCC^   AC    -           U   UAG-     CGUCUAAC 
  120       110       100         90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
He Wh
Star sequence

Dya-Mir-1175-P3_5p*
mirBase accessionNone
Sequence 
0- AGUAGAAUAGCAGGCUUAUCACA -23
Get sequence
Mature sequence

Dya-Mir-1175-P3_3p
mirBase accessionNone
Sequence 
42- UGAGAUUCUUCUAUUCUACUUU -64
Get sequence