MirGeneDB 2.1

MirGeneDB ID

Bge-Mir-29-P2g

Family name MIR-29 (all species)
Seed AGCACCA
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-29-P1k  Bge-Mir-29-P1l  Bge-Mir-29-P2h 
Orthologues Asu-Mir-29-P2  Bfl-Mir-29-P2  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cgi-Mir-29-P2  Cin-Mir-29-P2  Csc-Mir-29-P2  Cte-Mir-29-P2  Dan-Mir-29-P2g  Dma-Mir-29-P2g  Dme-Mir-29-P2g  Dmo-Mir-29-P2g  Dpu-Mir-29-P2g  Dsi-Mir-29-P2g  Dya-Mir-29-P2g  Esc-Mir-29-P2  Isc-Mir-29-P2  Lgi-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ovu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Sko-Mir-29-P2  Spu-Mir-29-P2  Tca-Mir-29-P2g  Xbo-Mir-29-P2 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Bger_2.0)
KZ615958.1: 104380-104439 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUCGCAUGUGCACUAACCUGCUGUGAGCAAAGCUGACUCGUGCGGUUGCCACGUUGUGUCUGAGAUGCGUAGCACCACAUGAUUCAGCUUAGUUCGCAGUAGCCUCUAACAGCCGCUGCU
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Structure
        10         20        30        40        50        60
CUCGCAUGUGCACUAAC-|          A       C     C   U  C   UUGUGU 
                  CUGCUGUGAGC AAGCUGA UCGUG GGU GC ACG      C
                  GAUGACGCUUG UUCGACU AGUAC CCA CG UGC      U
UCGUCGCCGACAAUCUCC^          A       U     A   -  A   GUAGAG 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Star sequence

Bge-Mir-29-P2g_5p*

mirBase accessionNone
Sequence
0- AGCUGACUCGUGCGGUUGCCACG -23
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Mature sequence

Bge-Mir-29-P2g_3p

mirBase accessionNone
Sequence
39- UAGCACCACAUGAUUCAGCUU -60
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