MirGeneDB 2.1
MirGeneDB ID

Tca-Mir-29-P2g

Family name MIR-29 (all species)
Seed AGCACCA
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-995
Paralogues Tca-Mir-29-P1  Tca-Mir-29-P2h 
Orthologues Asu-Mir-29-P2  Bfl-Mir-29-P2  Bge-Mir-29-P2g  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cgi-Mir-29-P2  Cin-Mir-29-P2  Csc-Mir-29-P2  Cte-Mir-29-P2  Dan-Mir-29-P2g  Dma-Mir-29-P2g  Dme-Mir-29-P2g  Dmo-Mir-29-P2g  Dpu-Mir-29-P2g  Dsi-Mir-29-P2g  Dya-Mir-29-P2g  Esc-Mir-29-P2  Isc-Mir-29-P2  Lgi-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ovu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Sko-Mir-29-P2  Spu-Mir-29-P2  Xbo-Mir-29-P2 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Tcas5.2)		 LG10: 5002382-5002440 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUCUAACGCUACUAAUUUAGCAGAACUCUGAGCUGAAUCUUGAGGUGCUUCCGUGGUUUGGGCUCGUAGCACCACAUGAUUCAGCUUACGUUUCCGCUAACUACCAUCGCAUCUUGAAC
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Structure
        10           20        30        40        50         
UUCUAACGCUACUAAUU---|   A   CUC           U  A      UC  UGGUU 
                    UAGC GAA   UGAGCUGAAUC UG GGUGCU  CG     \
                    AUCG CUU   AUUCGACUUAG AC CCACGA  GC     U
CAAGUUCUACGCUACCAUCA^   C   UGC           U  A      U-  UCGGG 
       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-29-P2g_5p*
mirBase accessionMIMAT0018628
Sequence 
0- AGCUGAAUCUUGAGGUGCUUCCG -23
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Mature sequence

Tca-Mir-29-P2g_3p
mirBase accessionMIMAT0018629
Sequence 
36- UAGCACCACAUGAUUCAGCUUAC -59
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