MirGeneDB 3.0
MirGeneDB ID

Bge-Mir-29-P2h

Family name MIR-29 (all species)
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-29-P1k  Bge-Mir-29-P1l  Bge-Mir-29-P2g 
Orthologues Aae-Mir-29-P2h  Aga-Mir-29-P2h  Agr-Mir-29-P2  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cte-Mir-29-P2  Dan-Mir-29-P2h  Dgr-Mir-29-P2  Dma-Mir-29-P2  Dme-Mir-29-P2h  Dmo-Mir-29-P2h  Dpu-Mir-29-P2  Dsi-Mir-29-P2h  Dya-Mir-29-P2h  Eba-Mir-29-P2  Esc-Mir-29-P2  Gpa-Mir-29-P2h  Gsp-Mir-29  Hme-Mir-29-P2h  Hru-Mir-29-P2  Lgi-Mir-29-P2  Lhy-Mir-29-P2  Llo-Mir-29-P2  Mgi-Mir-29-P2  Mom-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ofu-Mir-29-P2  Ovu-Mir-29-P2  Pau-Mir-29-P2  Pcr-Mir-29-P2  Pdu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Pve-Mir-29-P2  Rph-Mir-29-P2  Sko-Mir-29-P2  Sme-Mir-29-o2  Spu-Mir-29-P2  Tca-Mir-29-P2h  War-Mir-29-P2  Xbo-Mir-29-P2 
Node of Origin (locus) Neoptera
Node of Origin (family) Bilateria
Genome context
(Bger_2.0)		 KZ614377.1: 366509-366566 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-29-P2h)		 Mir-2-P7 KZ614377.1: 360106-360165 [+] Ensembl
Mir-29-P2h KZ614377.1: 366509-366566 [+] Ensembl
Seed AGCACCA
Precursor
(pre-Mir +30nt flank)		 
CGUCUGCUUUGCGUGUUGGGCUCUUGGCCGAGUUGAAUUUUGUGGCUGCUUCACAUAAAUUAAUUGUAGCACCAUGGGAUUCAGCUUAGUCCAUAGCCACCUGCUUCCUUGCAUUGUG
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Structure
        10          20         30        40        50         
CGUCUGCUUUGCGUGUUG--|   CU   - CG          UG   C    U  CAUAA 
                    GGCU  UGG C  AGUUGAAUUU  UGG UGCU CA     \
                    CCGA  ACC G  UCGACUUAGG  ACC ACGA GU     A
GUGUUACGUUCCUUCGUCCA^   U-   U AU          GU   -    U  UAAUU 
      110       100         90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ad Ad Co Co Di Di Eg Eg Em Em Em Em Em Em Em Em Em Em Ny Ny Ny Ny Ny Ny Ny Ny Ov
Star sequence

Bge-Mir-29-P2h_5p*
mirBase accessionNone
Sequence 
0- AGUUGAAUUUUGUGGCUGCUUCA -23
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Mature sequence

Bge-Mir-29-P2h_3p
mirBase accessionNone
Sequence 
36- UAGCACCAUGGGAUUCAGCUUA -58
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