MirGeneDB 2.1

MirGeneDB ID

Bge-Novel-2-P3

Family name BGE-NOVEL-2 (all species)
Seed UCGGACU
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Novel-2-P1a  Bge-Novel-2-P1b  Bge-Novel-2-P2  Bge-Novel-2-P4  Bge-Novel-2-P5 
Orthologues
Node of Origin (locus) B. germanica
Node of Origin (family) B. germanica
Genome context
(Bger_2.0)
KZ614580.1: 776960-777017 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
ACAACACUGGAGAAGAAUGGUUCUGCGUGGACUCGAACAUCGGUUCCGAAACAAUAAAUUGAGUUGGUUCGGACUGGUGUUAGAGACGAUGCAUAAUCAAAUAUCAUCCUGGAUGCAC
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Structure
        10          20         30        40        50         
ACAACACUGGAGAAGAA--     C     -|GA   G         U     A AAUAAA 
                   UGGUU UGCGU G  CUC AACAUCGGU CCGAA C      \
                   ACUAA ACGUA C  GAG UUGUGGUCA GGCUU G      U
CACGUAGGUCCUACUAUAA     U     G^A-   A         -     G UUGAGU 
      110       100        90         80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Star sequence

Bge-Novel-2-P3_5p*

mirBase accessionNone
Sequence
0- ACUCGAACAUCGGUUCCGAAAC -22
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Mature sequence

Bge-Novel-2-P3_3p

mirBase accessionNone
Sequence
37- UUCGGACUGGUGUUAGAGACG -58
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