MirGeneDB 3.0
MirGeneDB ID

Bge-Novel-2-P4

Family name BGE-NOVEL-2 (all species)
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Novel-2-P1a  Bge-Novel-2-P1b  Bge-Novel-2-P2  Bge-Novel-2-P3  Bge-Novel-2-P5 
Orthologues
Node of Origin (locus) B. germanica
Node of Origin (family) B. germanica
Genome context
(Bger_2.0)		 KZ614580.1: 763451-763508 [-] Ensembl
Clustered miRNAs
(< 50kb from Novel-2-P4)		 Novel-2-P4 KZ614580.1: 763451-763508 [-] Ensembl
Novel-2-P3 KZ614580.1: 776960-777017 [-] Ensembl
Novel-2-P1b KZ614580.1: 779425-779481 [-] Ensembl
Novel-2-P2 KZ614580.1: 781562-781617 [-] Ensembl
Novel-2-P1a KZ614580.1: 782962-783018 [-] Ensembl
Seed UCGGACU
Precursor
(pre-Mir +30nt flank)		 
ACAACACUGGAGAAGAAUGGUUCUGCGUGGACUCGAACACCGGUUCCGAAACAAUAAAUUGAGUUUGUUCGGACUGGUGUUAGAGACGAUGCAUAAUCAAAUAUCAUCAUGGAUGCAC
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Structure
        10          20         30        40        50         
ACAACACUGGAGAAGAA--     C     -|GA   G         U     A AAUAAA 
                   UGGUU UGCGU G  CUC AACACCGGU CCGAA C      U
                   ACUAA ACGUA C  GAG UUGUGGUCA GGCUU G      U
CACGUAGGUACUACUAUAA     U     G^A-   A         -     - UUUGAG 
      110       100        90         80         70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Ad Co Co Di Di Eg Eg Em Em Em Em Em Em Em Em Em Em Ny Ny Ny Ny Ny Ny Ny Ny Ov
Star sequence

Bge-Novel-2-P4_5p*
mirBase accessionNone
Sequence 
0- ACUCGAACACCGGUUCCGAAAC -22
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Mature sequence

Bge-Novel-2-P4_3p
mirBase accessionNone
Sequence 
37- UUCGGACUGGUGUUAGAGACG -58
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