| MirGeneDB ID | Bge-Novel-2-P4 |
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| Family name |
BGE-NOVEL-2 (all species) |
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| Seed |
UCGGACU |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
Bge-Novel-2-P1a
Bge-Novel-2-P1b
Bge-Novel-2-P2
Bge-Novel-2-P3
Bge-Novel-2-P5
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ614580.1: 763451-763508 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACAACACUGGAGAAGAAUGGUUCUGCGUGGACUCGAACACCGGUUCCGAAACAAUAAAUUGAGUUUGUUCGGACUGGUGUUAGAGACGAUGCAUAAUCAAAUAUCAUCAUGGAUGCAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACAACACUGGAGAAGAA-- C -|GA G U A AAUAAA
UGGUU UGCGU G CUC AACACCGGU CCGAA C U
ACUAA ACGUA C GAG UUGUGGUCA GGCUU G U
CACGUAGGUACUACUAUAA U G^A- A - - UUUGAG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
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|---|
| 3' NTU |
No
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|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Star sequence |
Bge-Novel-2-P4_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACUCGAACACCGGUUCCGAAAC -22
Get sequence
|
|---|
| Mature sequence |
Bge-Novel-2-P4_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UUCGGACUGGUGUUAGAGACG -58
Get sequence
|
|---|
