| MirGeneDB ID | Bge-Novel-2-P5 |
|---|
| Family name |
BGE-NOVEL-2 (all species) |
|---|
| Species |
Cockroach (Blattella germanica) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Bge-Novel-2-P1a
Bge-Novel-2-P1b
Bge-Novel-2-P2
Bge-Novel-2-P3
Bge-Novel-2-P4
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
B. germanica
|
|---|
| Node of Origin (family) |
B. germanica
|
|---|
Genome context
(Bger_2.0) |
JPZV02055629.1: 521-576 [-]
Ensembl
|
|---|
| Seed |
CUCGAAC |
|---|
Precursor
(pre-Mir +30nt flank) |
UACAAGGCGAGUGAGCAUGGUUCUGCACAGGCUCGAACUCAAGUCUGAACGAUAAAUUUAAUUUGUUCAAACUUUUGUCCGAGUCUAUGCGGAAUCACAGAUCAUCCAUUGGUCGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UACAAGGCGAGUGAGCA--| C A UC C UAAA
UGGUUCUGCA AGGCUCG AC AAGU UGAACGA U
ACUAAGGCGU UCUGAGC UG UUCA ACUUGUU U
AGCUGGUUACCUACUAGAC^ A C UU A UAAU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Bge-Novel-2-P5_5p |
| mirBase accession | None |
|---|
| Sequence |
0- GCUCGAACUCAAGUCUGAACGA -22
Get sequence
|
|---|
| Star sequence |
Bge-Novel-2-P5_3p* |
| mirBase accession | None |
|---|
| Sequence |
34- GUUCAAACUUUUGUCCGAGUCU -56
Get sequence
|
|---|
