MirGeneDB 2.1

MirGeneDB ID

Bge-Mir-929-v1

Family name MIR-929 (all species)
Seed AAUUGAC
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-929-v2 
Orthologues Dan-Mir-929  Dme-Mir-929  Dmo-Mir-929  Dsi-Mir-929  Dya-Mir-929  Hme-Mir-929  Tca-Mir-929 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Bger_2.0)
KZ620164.1: 1254-1316 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CGCGAUGUGAAAUUGAACUCAACCGGGGUCAAAUUGACUCUAGUAGGGAGUCCGUAUUAUAAACAUAGUGACUCCCUAACGGAGUCAGAUUGACCUCUUUGAAGUGAACACGACGUGCGAAGA
Get precursor sequence
Structure
        10           20        30        40        50        60 
CGCGAUGUGAAAUUGAAC---|   CC        A        AG         CGUAUUAU 
                     UCAA  GGGGUCAA UUGACUCU  UAGGGAGUC        \
                     AGUU  CUCCAGUU GACUGAGG  AUCCCUCAG        A
AGAAGCGUGCAGCACAAGUGA^   U-        A        CA         UGAUACAA 
 120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Mature sequence

Bge-Mir-929-v1_5p

mirBase accessionNone
Sequence
0- AAAUUGACUCUAGUAGGGAGUC -22
Get sequence
Star sequence

Bge-Mir-929-v1_3p*

mirBase accessionNone
Sequence
41- CUCCCUAACGGAGUCAGAUUGA -63
Get sequence