MirGeneDB 3.0

MirGeneDB ID

Dsi-Mir-929

Family name MIR-929 (all species)
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-929
Paralogues
Orthologues Aae-Mir-929-P1  Aae-Mir-929-P2  Aga-Mir-929  Bge-Mir-929-v1  Dan-Mir-929  Dlo-Mir-929-v1  Dme-Mir-929  Dmo-Mir-929  Dya-Mir-929  Gpa-Mir-929  Hme-Mir-929  Tca-Mir-929 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)
3R: 105504-105560 [+] UCSC Ensembl
Seed AAUUGAC
Precursor
(pre-Mir +30nt flank)
GGCAUGGCGCAACCAGUCCUGGUGAAGCUCAAAUUGACUCUAGUAGGGAGUCCUUUAAUGAGCGACUCCCUAACGGAGUCAGAUUGAGCUACAAAGGAGCGAGACAACAGAGGAGCA
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Structure
        10           20        30        40        50        
GGCAUGGCGCAACCAGU---|  GG  A       A        AG         CUUUA 
                    CCU  UG AGCUCAA UUGACUCU  UAGGGAGUC     \
                    GGA  AC UCGAGUU GACUGAGG  AUCCCUCAG     A
ACGAGGAGACAACAGAGCGA^  A-  A       A        CA         CGAGU 
     110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
He Wh
Mature sequence

Dsi-Mir-929_5p

mirBase accessionMIMAT0012459
Sequence
0- AAAUUGACUCUAGUAGGGAGUC -22
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Star sequence

Dsi-Mir-929_3p*

mirBase accessionMIMAT0012460
Sequence
35- CUCCCUAACGGAGUCAGAUUGA -57
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