MirGeneDB 2.1

MirGeneDB ID

Bge-Mir-3049

Family name MIR-3049 (all species)
Seed CGGGAAG
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues Tca-Mir-3049 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Bger_2.0)
KZ614976.1: 254390-254450 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUGACCCGGAUGGACUGAGCCUUCGCUGAGUCGGGAAGGCAGUUGCGGCGGAUUGUGACGUCAGACGAGUCCGUCCAACUCCUUUCCGUCUCGGCGUCGGGCGUCAUCAUUAACACCUACU
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Structure
        10         20         30        40        50        60 
AUGACCCGGAUGGACUGA-    U-|      U        C     C        GUGACG 
                   GCCU  CGCUGAG CGGGAAGG AGUUG GGCGGAUU      \
                   CGGG  GCGGCUC GCCUUUCC UCAAC CUGCCUGA      U
UCAUCCACAAUUACUACUG    CU^      U        -     -        GCAGAC 
 .       110       100        90         80         70
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Mature sequence

Bge-Mir-3049_5p

mirBase accessionNone
Sequence
0- UCGGGAAGGCAGUUGCGGCGGAUU -24
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Star sequence

Bge-Mir-3049_3p*

mirBase accessionNone
Sequence
39- UCCGUCCAACUCCUUUCCGUCU -61
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