MirGeneDB 2.1

MirGeneDB ID

Bge-Novel-10-P2

Family name BGE-NOVEL-10 (all species)
Seed CGUUGUA
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Novel-10-P1 
Orthologues
Node of Origin (locus) B. germanica
Node of Origin (family) B. germanica
Genome context
(Bger_2.0)
KZ614500.1: 92716-92772 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGAGCAAAAUUGAUAUUGCUGGAUUCUUUCACGUUGUAACUUGUGUAAAUUAUGAUGUAAGAUAUAAUUACACUUGUUACGACCGGAAAGCACCAGUUACUUACUGCAUUGCACUGG
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Structure
        10           20        30        40        50        
UGAGCAAAAUUGAUAUU---|    AUU     AC        UU      A    GAUG 
                    GCUGG   CUUUC  GUUGUAAC  GUGUAA UUAU    U
                    UGACC   GAAAG  CAGCAUUG  CACAUU AAUA    A
GGUCACGUUACGUCAUUCAU^    AC-     GC        UU      -    UAGA 
     110       100         90        80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Mature sequence

Bge-Novel-10-P2_5p

mirBase accessionNone
Sequence
0- ACGUUGUAACUUGUGUAAAUUAU -23
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Star sequence

Bge-Novel-10-P2_3p*

mirBase accessionNone
Sequence
35- AAUUACACUUGUUACGACCGGA -57
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