| MirGeneDB ID | Bge-Novel-10-P1 |
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| Family name |
BGE-NOVEL-10 (all species) |
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| Seed |
CGUUGUA |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
Bge-Novel-10-P2
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ614500.1: 92245-92301 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGAGCAAAAUUGAUAUUGCUGGAUUCUUUCACGUUGUAACUUGUGUAAAUUAUGAUGUAAGAUAUAAUUACACUUGUUACGACCGGAAAGCACCAGUUACUUACUGCAUUGCACUGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGAGCAAAAUUGAUAUU---| AUU AC UU A GAUG
GCUGG CUUUC GUUGUAAC GUGUAA UUAU U
UGACC GAAAG CAGCAUUG CACAUU AAUA A
GGUCACGUUACGUCAUUCAU^ AC- GC UU - UAGA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Mature sequence |
Bge-Novel-10-P1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- ACGUUGUAACUUGUGUAAAUUAU -23
Get sequence
|
|---|
| Star sequence |
Bge-Novel-10-P1_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- AAUUACACUUGUUACGACCGGA -57
Get sequence
|
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