MirGeneDB 3.0
MirGeneDB ID

Bge-Novel-20

Family name BGE-NOVEL-20 (all species)
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) B. germanica
Node of Origin (family) B. germanica
Genome context
(Bger_2.0)		 KZ614999.1: 53381-53441 [-] Ensembl
Clustered miRNAs
(< 50kb from Novel-20)		 Novel-20 KZ614999.1: 53381-53441 [-] Ensembl
Mir-3-P28b-v1 KZ614999.1: 53646-53704 [-] Ensembl
Mir-3-P28b-v2 KZ614999.1: 53646-53704 [-] Ensembl
Mir-3-P29-v1 KZ614999.1: 54531-54589 [-] Ensembl
Mir-3-P29-v2 KZ614999.1: 54531-54589 [-] Ensembl
Mir-36 KZ614999.1: 58272-58329 [-] Ensembl
Seed CACUGGA
Precursor
(pre-Mir +30nt flank)		 
AAAGGGAAGGUGAUAUGCACUAUUGGUGAAUGGUAGUGACUUCCCAAGUGAUGUUACAUUCUAAAUUCAUCACUGGAAAGGCAAUAUCAUUAGCUACAAGUGAGAAGCAACAAACUAAGAU
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Structure
        10          20        30        40        50        60
AAAGGGAAGGUGAUAUG--|   AU    G       G  A   C   A      UUACAU 
                   CACU  UGGU AAUGGUA UG CUU CCA GUGAUG      U
                   GUGA  AUCG UUACUAU AC GAA GGU CACUAC      C
UAGAAUCAAACAACGAAGA^   AC    A       A  G   A   -      UUAAAU 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Ad Co Co Di Di Eg Eg Em Em Em Em Em Em Em Em Em Em Ny Ny Ny Ny Ny Ny Ny Ny Ov
Star sequence

Bge-Novel-20_5p*
mirBase accessionNone
Sequence 
0- UGGUAGUGACUUCCCAAGUGAUG -23
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Mature sequence

Bge-Novel-20_3p
mirBase accessionNone
Sequence 
39- UCACUGGAAAGGCAAUAUCAUU -61
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