| MirGeneDB ID | Bge-Novel-4 |
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| Family name |
BGE-NOVEL-4 (all species) |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ614366.1: 1212825-1212881 [-]
Ensembl
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| Seed |
UCGUUCU |
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Precursor
(pre-Mir +30nt flank) |
AGAAAGAAGACCUUUUGGAGCUGGACGGAGAGGGCAAUGAUAUGGACGAGGUUAUAAUAUACUCCUUCGUUCUAAUCAUUGCCAUCUUUGUUAUACUCGCAUCUCAUCUUUGAAGAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AGAAAGAAGACCUUUUG--| CUG G AU UUAUAA
GAG GACGGAGA GGCAAUGAU GGACGAGG \
CUC UUGUUUCU CCGUUACUA CUUGCUUC U
AAGAAGUUUCUACUCUACG^ AUA A AU CUCAUA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
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| Star sequence |
Bge-Novel-4_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGGGCAAUGAUAUGGACGAGGU -22
Get sequence
|
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| Mature sequence |
Bge-Novel-4_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UUCGUUCUAAUCAUUGCCAUCU -57
Get sequence
|
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