MirGeneDB 3.0
MirGeneDB ID

Bge-Mir-306

Family name MIR-306 (all species)
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues Aae-Mir-306  Aga-Mir-306  Dan-Mir-306  Dlo-Mir-306  Dme-Mir-306  Dmo-Mir-306  Dsi-Mir-306  Dya-Mir-306  Gpa-Mir-306  Hme-Mir-306 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Bger_2.0)		 KZ614731.1: 668749-668804 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-306)		 Mir-9-P13 KZ614731.1: 666805-666865 [-] Ensembl
Mir-9-P12-v1 KZ614731.1: 668640-668700 [-] Ensembl
Mir-9-P12-v2 KZ614731.1: 668641-668699 [-] Ensembl
Mir-306 KZ614731.1: 668749-668804 [-] Ensembl
Mir-9-P11 KZ614731.1: 672851-672910 [-] Ensembl
Seed CAGGUAC
Precursor
(pre-Mir +30nt flank)		 
AUUCAGCAGUAGCAUGUGCUGUUUCCUCUGUCAGGUACUGAGUGACUCUGAGUAAUUUAAUUCUCAGAGGCACUUGGUUUCUGGCCGAGUGAACAGUAUGAACAGCGUAGUUAGCA
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Structure
        10          20        30        40        50       
AUUCAGCAGUAGCAUGU--|     UC   U      U  UG    A       UAAU 
                   GCUGUU  CUC GUCAGG AC  AGUG CUCUGAG    U
                   UGACAA  GAG CGGUCU UG  UCAC GAGACUC    U
ACGAUUGAUGCGACAAGUA^     GU   C      U  GU    G       UUAA 
    110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Drosha cut -1 on both arms.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ad Ad Co Co Di Di Eg Eg Em Em Em Em Em Em Em Em Em Em Ny Ny Ny Ny Ny Ny Ny Ny Ov
Mature sequence

Bge-Mir-306_5p
mirBase accessionNone
Sequence 
0- UCAGGUACUGAGUGACUCUGAG -22
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Star sequence

Bge-Mir-306_3p*
mirBase accessionNone
Sequence 
34- CAGAGGCACUUGGUUUCUGGCC -56
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